Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC2.14□□□□□ -2.07
SSNA1O43805 AL450270.1-201ENST00000606160 391 ntBASIC2.14□□□□□ -2.07
SSNA1O43805 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
SSNA1O43805 AC104820.1-201ENST00000624183 307 ntBASIC2.14□□□□□ -2.07
SSNA1O43805 AC010872.1-201ENST00000624225 675 ntBASIC2.14□□□□□ -2.07
SSNA1O43805 VPS8-228ENST00000628962 207 ntTSL 5 BASIC2.14□□□□□ -2.07
SSNA1O43805 CRYM-AS1-204ENST00000637983 556 ntBASIC2.14□□□□□ -2.07
SSNA1O43805 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
SSNA1O43805 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
SSNA1O43805 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SSNA1O43805 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.13□□□□□ -2.07
SSNA1O43805 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SSNA1O43805 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 RNU1-52P-201ENST00000384190 164 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 RNU2-43P-201ENST00000410306 190 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 RAB9AP3-201ENST00000412737 573 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 USP9YP27-201ENST00000418455 438 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AC098614.2-201ENST00000426040 255 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 MTCO3P30-201ENST00000426425 670 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 RPL26P6-201ENST00000440913 438 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 RNFT1P2-201ENST00000443064 757 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 IFNA11P-201ENST00000446352 526 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.13□□□□□ -2.07
SSNA1O43805 RAB9AP1-201ENST00000449393 573 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.13□□□□□ -2.07
SSNA1O43805 AC233279.1-201ENST00000455300 423 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.13□□□□□ -2.07
SSNA1O43805 AC078857.1-201ENST00000469870 667 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 MRPL42P6-201ENST00000486397 371 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.13□□□□□ -2.07
SSNA1O43805 CEACAMP10-202ENST00000495431 496 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC2.13□□□□□ -2.07
SSNA1O43805 AC112673.1-201ENST00000513168 575 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.13□□□□□ -2.07
SSNA1O43805 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 RNU6-885P-201ENST00000516607 104 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 IGLV3-17-201ENST00000519099 244 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 SUB1P1-201ENST00000524415 382 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 CR383656.7-201ENST00000548164 174 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AC008127.2-201ENST00000549925 1075 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.13□□□□□ -2.07
SSNA1O43805 MIR5680-201ENST00000577577 84 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 OR4K8P-201ENST00000578842 1048 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 VN1R78P-201ENST00000597393 564 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AC133794.1-201ENST00000602731 914 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AC013553.2-201ENST00000604244 589 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AL590392.1-201ENST00000604960 446 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AL023583.1-201ENST00000607518 1143 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AL592148.2-201ENST00000612210 372 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
SSNA1O43805 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
SSNA1O43805 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
SSNA1O43805 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.13□□□□□ -2.07
SSNA1O43805 AC009902.3-201ENST00000606235 2172 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 AC000403.1-201ENST00000613696 3585 ntBASIC2.13□□□□□ -2.07
SSNA1O43805 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SSNA1O43805 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SSNA1O43805 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSNA1O43805 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SSNA1O43805 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SSNA1O43805 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
SSNA1O43805 RNU6-582P-201ENST00000362989 107 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 U3.19-201ENST00000390893 196 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 MIR1290-201ENST00000408735 78 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AL512844.2-201ENST00000433990 593 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 THAP5P1-201ENST00000439089 262 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AC009237.8-201ENST00000445492 379 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 COX6CP12-201ENST00000446748 202 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 NDUFB4P2-201ENST00000509515 391 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.12□□□□□ -2.07
SSNA1O43805 MTND4LP31-201ENST00000514859 294 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.12□□□□□ -2.07
SSNA1O43805 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.12□□□□□ -2.07
SSNA1O43805 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.12□□□□□ -2.07
SSNA1O43805 AC007954.1-201ENST00000554198 494 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 RN7SL753P-201ENST00000581238 290 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AC005498.1-201ENST00000592125 465 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AL355877.2-201ENST00000603670 358 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AL031176.1-201ENST00000604554 466 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 OR10AB1P-201ENST00000609613 938 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AL136295.6-201ENST00000610486 658 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.12□□□□□ -2.07
SSNA1O43805 MIR7515-201ENST00000637837 67 ntBASIC2.12□□□□□ -2.07
SSNA1O43805 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms