Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 RPS6P12-201ENST00000432491 726 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.51□□□□□ -1.69
PRPF3O43395 TPT1P14-201ENST00000448018 505 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF3O43395 HMGB3P22-202ENST00000451823 572 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 OR9M1P-201ENST00000459641 921 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 RPL21P11-201ENST00000461458 483 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 PPIAP15-201ENST00000479662 484 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.51□□□□□ -1.69
PRPF3O43395 AC011979.2-201ENST00000527568 352 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF3O43395 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF3O43395 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRPF3O43395 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF3O43395 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AC099489.2-201ENST00000574976 260 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF3O43395 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF3O43395 AC012443.1-201ENST00000605605 231 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.51□□□□□ -1.69
PRPF3O43395 uc_338.12-201ENST00000616344 181 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 AC019226.1-201ENST00000625666 515 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.51□□□□□ -1.69
PRPF3O43395 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.51□□□□□ -1.69
PRPF3O43395 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.51□□□□□ -1.69
PRPF3O43395 LINC02471-203ENST00000641941 4752 ntBASIC4.51□□□□□ -1.69
PRPF3O43395 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PRPF3O43395 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
PRPF3O43395 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PRPF3O43395 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF3O43395 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF3O43395 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.5□□□□□ -1.69
PRPF3O43395 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PRPF3O43395 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 GNG5P1-201ENST00000255500 204 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 RNA5SP515-201ENST00000364570 118 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 MIR1290-201ENST00000408735 78 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 RPL21P66-201ENST00000426566 466 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF3O43395 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF3O43395 AC244505.5-201ENST00000443639 207 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 AC010460.1-201ENST00000507087 466 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 RNU6-1073P-201ENST00000517182 106 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AC100870.1-201ENST00000522035 505 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 DEFB108A-201ENST00000530110 222 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 OR4T1P-201ENST00000554933 911 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.5□□□□□ -1.69
PRPF3O43395 MIR3160-1-201ENST00000577972 85 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 FAM60BP-201ENST00000578364 658 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 OR4K8P-201ENST00000578842 1048 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF3O43395 AL606490.9-201ENST00000603331 271 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AL136363.2-201ENST00000604173 851 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AL022099.1-201ENST00000604551 712 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AL034351.1-201ENST00000605288 668 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AL589743.7-201ENST00000612637 233 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF3O43395 AC103858.2-201ENST00000621471 543 ntBASIC4.5□□□□□ -1.69
PRPF3O43395 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.5□□□□□ -1.69
PRPF3O43395 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PRPF3O43395 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.5□□□□□ -1.69
PRPF3O43395 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF3O43395 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.5□□□□□ -1.69
PRPF3O43395 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRPF3O43395 BDP1P-201ENST00000582658 1990 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF3O43395 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF3O43395 RNU5A-6P-201ENST00000384136 116 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
PRPF3O43395 RPL27AP8-201ENST00000424277 446 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF3O43395 OR4K11P-201ENST00000431829 904 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF3O43395 TIMM9P1-201ENST00000436122 256 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 Z74696.2-201ENST00000436514 498 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 RPS24P1-201ENST00000438550 371 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC007967.1-201ENST00000455422 1159 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC4.49□□□□□ -1.69
PRPF3O43395 NDUFB4P2-201ENST00000509515 391 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC004062.1-201ENST00000509926 645 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 RNU6-798P-201ENST00000516912 103 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.49□□□□□ -1.69
PRPF3O43395 DEFB108D-201ENST00000527787 222 ntBASIC4.49□□□□□ -1.69
PRPF3O43395 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.49□□□□□ -1.69
PRPF3O43395 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms