Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
HOXA2O43364 ST7-212ENST00000422922 1887 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA2O43364 U8.8-201ENST00000365399 135 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA2O43364 SNORA70H-201ENST00000383910 135 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 SNORA70J-201ENST00000384182 135 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 MRPL35P1-201ENST00000404272 572 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 RNU6-607P-201ENST00000411283 108 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 AC016712.1-201ENST00000431088 378 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA2O43364 TMSB4XP3-201ENST00000445144 114 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 RPL7L1P1-201ENST00000448259 785 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 AL513124.1-201ENST00000450410 614 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 NDUFB4P10-201ENST00000452541 359 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA2O43364 Y_RNA.644-201ENST00000459006 113 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 AC010683.1-201ENST00000473673 378 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC6.14□□□□□ -1.43
HOXA2O43364 RPS27AP13-201ENST00000498403 237 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 OR51K1P-201ENST00000510214 950 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 HIGD1AP3-201ENST00000515857 278 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 SNORA31.3-201ENST00000516029 96 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 Y_RNA.674-201ENST00000516362 113 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 RPL23AP87-202ENST00000573039 466 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 MIR5701-3-201ENST00000578890 82 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 MIR5701-1-201ENST00000585138 82 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
HOXA2O43364 MIR5701-2-201ENST00000615634 82 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.14□□□□□ -1.43
HOXA2O43364 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA2O43364 AC144833.1-201ENST00000567953 4089 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
HOXA2O43364 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA2O43364 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA2O43364 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
HOXA2O43364 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA2O43364 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
HOXA2O43364 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.14□□□□□ -1.43
HOXA2O43364 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HOXA2O43364 AC087516.1-201ENST00000561236 2428 ntBASIC6.14□□□□□ -1.43
HOXA2O43364 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
HOXA2O43364 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 C4BPAP1-201ENST00000415474 1893 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
HOXA2O43364 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
HOXA2O43364 RNU6-1159P-201ENST00000362933 107 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 Y_RNA.83-201ENST00000363005 113 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 SNORD1C-201ENST00000363315 78 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 RNA5SP234-201ENST00000363916 119 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 Y_RNA.269-201ENST00000364685 89 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 Y_RNA.277-201ENST00000364754 102 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 RNA5SP240-201ENST00000365355 128 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXA2O43364 SNORA70-201ENST00000384436 135 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 MIR578-201ENST00000384828 96 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 MIR215-201ENST00000384858 110 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 MIR223-201ENST00000385204 110 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 SNORA68.2-201ENST00000391263 128 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 U3.35-201ENST00000408405 208 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 U3.42-201ENST00000408746 214 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 AL159987.2-201ENST00000432754 307 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXA2O43364 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXA2O43364 PRDX3P3-201ENST00000447765 522 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 AC004129.2-201ENST00000457229 287 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 RNU6ATAC28P-201ENST00000459249 118 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 RN7SL515P-201ENST00000463999 297 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 RPS23P5-201ENST00000495419 428 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 AC067942.3-201ENST00000512025 362 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 SNORA25.14-201ENST00000516481 132 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 RNU6-914P-201ENST00000516749 109 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 SNRPGP16-201ENST00000533275 226 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC6.13□□□□□ -1.43
HOXA2O43364 AC044860.2-201ENST00000561005 179 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 AC006115.2-201ENST00000596823 202 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 AL450472.3-201ENST00000615578 367 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 AC079776.5-201ENST00000641920 211 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXA2O43364 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.13□□□□□ -1.43
HOXA2O43364 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXA2O43364 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
HOXA2O43364 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 AC138907.8-201ENST00000623981 2256 ntBASIC6.13□□□□□ -1.43
HOXA2O43364 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXA2O43364 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.13□□□□□ -1.43
HOXA2O43364 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
HOXA2O43364 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
HOXA2O43364 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.12□□□□□ -1.43
HOXA2O43364 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 Y_RNA.27-201ENST00000362540 103 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 RNU6-1266P-201ENST00000362794 105 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 SNORD113-1-201ENST00000365321 69 ntBASIC6.12□□□□□ -1.43
HOXA2O43364 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
HOXA2O43364 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms