Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN1O15353 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN1O15353 OR4G11P-202ENST00000642116 1414 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
FOXN1O15353 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN1O15353 AC093311.1-201ENST00000506586 2021 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 FRG1BP-201ENST00000278882 761 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN1O15353 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN1O15353 FRG1CP-201ENST00000358464 769 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 RNU4-79P-201ENST00000362764 141 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 RNA5SP50-201ENST00000363731 107 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXN1O15353 Y_RNA.394-201ENST00000383942 103 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
FOXN1O15353 RPS3AP3-201ENST00000411933 242 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN1O15353 MTND2P23-201ENST00000422990 651 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN1O15353 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN1O15353 AC022022.1-201ENST00000430304 178 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN1O15353 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXN1O15353 AC008155.2-201ENST00000464337 397 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.64□□□□□ -1.67
FOXN1O15353 AC087312.1-201ENST00000471411 480 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AC012170.1-201ENST00000495139 359 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN1O15353 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.64□□□□□ -1.67
FOXN1O15353 OR4A12P-201ENST00000530847 918 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXN1O15353 AL512360.1-201ENST00000555346 234 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AC025678.1-201ENST00000567861 338 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 RPL23AP87-202ENST00000573039 466 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AC244505.7-201ENST00000599675 272 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 AC068722.2-201ENST00000618734 544 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 MIR7702-201ENST00000621931 59 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 GDI2P1-201ENST00000429312 1336 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.64□□□□□ -1.67
FOXN1O15353 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
FOXN1O15353 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.64□□□□□ -1.67
FOXN1O15353 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
FOXN1O15353 AL645937.1-201ENST00000641739 1652 ntBASIC4.64□□□□□ -1.67
FOXN1O15353 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN1O15353 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN1O15353 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN1O15353 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN1O15353 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN1O15353 SNORD56.2-201ENST00000363242 71 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 RNU6-839P-201ENST00000363347 108 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
FOXN1O15353 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
FOXN1O15353 RPS24P12-201ENST00000402084 394 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN1O15353 AL591419.1-201ENST00000427423 339 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AC008065.1-201ENST00000428525 348 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
FOXN1O15353 RPL37P21-201ENST00000435890 276 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 RPL7P29-201ENST00000437151 728 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 PPIAP17-201ENST00000438507 471 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 GAPDHP17-201ENST00000449858 1001 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 FABP3P2-201ENST00000453169 399 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC005726.1-201ENST00000494679 427 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 HMGB1P29-201ENST00000505659 499 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC026412.2-201ENST00000512270 1075 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 SCARNA14-201ENST00000516903 136 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN1O15353 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC009977.1-201ENST00000586015 570 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.63□□□□□ -1.67
FOXN1O15353 AL360085.1-201ENST00000604713 532 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AC007363.1-201ENST00000604736 620 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 RNU6-88P-201ENST00000606801 100 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AC103710.4-201ENST00000609301 899 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AC013412.1-201ENST00000610687 192 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 AL365204.3-201ENST00000612448 685 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN1O15353 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 AC107982.1-201ENST00000507171 1300 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 OR5BR1P-201ENST00000524992 1330 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
FOXN1O15353 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.63□□□□□ -1.67
FOXN1O15353 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.63□□□□□ -1.67
FOXN1O15353 GTF2H2B-203ENST00000508065 1432 ntBASIC4.63□□□□□ -1.67
FOXN1O15353 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
FOXN1O15353 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 CCT4P2-201ENST00000233836 1548 ntBASIC4.62□□□□□ -1.67
FOXN1O15353 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
FOXN1O15353 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms