Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 JKAMPP1-201ENST00000413804 919 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AC009237.5-201ENST00000414271 501 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM38O00635 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 ATP5HP2-201ENST00000433885 485 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 FAM103A2P-201ENST00000444122 354 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 SSXP1-201ENST00000453640 473 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 MTND1P11-201ENST00000456661 876 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 OR9M1P-201ENST00000459641 921 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC017037.1-201ENST00000508460 471 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM38O00635 RNA5SP519-201ENST00000516480 119 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 RNU6-875P-201ENST00000516488 106 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 IGHV3-32-201ENST00000519182 355 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM38O00635 AP003497.1-201ENST00000528472 562 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 DEFB108A-201ENST00000530110 222 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.23□□□□□ -1.73
TRIM38O00635 MIR4429-201ENST00000580105 73 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM38O00635 TPMTP1-201ENST00000592307 737 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 AL590099.1-201ENST00000615276 138 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AL445363.3-201ENST00000623080 671 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AC034229.5-201ENST00000624258 185 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 AC025048.6-202ENST00000627667 438 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.23□□□□□ -1.73
TRIM38O00635 AC138649.5-201ENST00000637456 137 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
TRIM38O00635 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.23□□□□□ -1.73
TRIM38O00635 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 MTND4P12-201ENST00000498999 1377 ntBASIC4.23□□□□□ -1.73
TRIM38O00635 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
TRIM38O00635 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.23□□□□□ -1.73
TRIM38O00635 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
TRIM38O00635 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM38O00635 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM38O00635 AC116096.1-201ENST00000566804 2314 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 CCT4P2-201ENST00000233836 1548 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC004925.1-201ENST00000624256 2706 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM38O00635 RN7SKP44-201ENST00000363602 316 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RNU4-12P-201ENST00000365233 139 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TRIM38O00635 Y_RNA.535-201ENST00000384612 99 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC097374.1-203ENST00000400783 485 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AL603766.1-201ENST00000407763 664 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RNA5SP36-201ENST00000410197 133 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RN7SKP235-201ENST00000410662 305 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 MIR1911-201ENST00000410783 80 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RPS7P13-201ENST00000413955 498 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC012498.1-201ENST00000424037 437 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AL157831.1-201ENST00000426134 473 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RPEP2-201ENST00000432149 701 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM38O00635 KCTD9P3-201ENST00000434597 1169 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 SKP1P1-201ENST00000438081 489 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM38O00635 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM38O00635 RNA5SP269-201ENST00000459032 137 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RN7SL812P-201ENST00000493791 279 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AL139099.1-201ENST00000497398 403 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.22□□□□□ -1.73
TRIM38O00635 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM38O00635 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM38O00635 AC017037.2-201ENST00000513850 890 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RNU6-314P-201ENST00000516574 104 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 RNU6-1003P-201ENST00000517099 105 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.22□□□□□ -1.73
TRIM38O00635 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM38O00635 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.22□□□□□ -1.73
TRIM38O00635 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM38O00635 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM38O00635 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.22□□□□□ -1.73
TRIM38O00635 AC012065.4-201ENST00000602445 679 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 AC012669.1-201ENST00000603209 283 ntBASIC4.22□□□□□ -1.73
TRIM38O00635 BNIP3P9-201ENST00000603714 553 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms