Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.94□□□□□ -2.1
SDCBPO00560 FRG1HP-204ENST00000617940 757 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
SDCBPO00560 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC1.94□□□□□ -2.1
SDCBPO00560 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.94□□□□□ -2.1
SDCBPO00560 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 AC046144.1-201ENST00000478559 1853 ntBASIC1.94□□□□□ -2.1
SDCBPO00560 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.94□□□□□ -2.1
SDCBPO00560 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
SDCBPO00560 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.94□□□□□ -2.1
SDCBPO00560 AC093536.2-201ENST00000565257 1406 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
SDCBPO00560 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SDCBPO00560 RNU6-1339P-201ENST00000363574 91 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 RNU6-730P-201ENST00000383954 104 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 RNU6-444P-201ENST00000383988 108 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AL122016.1-201ENST00000403365 367 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.93□□□□□ -2.1
SDCBPO00560 AL137014.1-201ENST00000420490 1226 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 PNRC2P1-201ENST00000423940 420 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.93□□□□□ -2.1
SDCBPO00560 AC126389.1-201ENST00000477436 290 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC104435.1-201ENST00000483483 166 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC135721.1-201ENST00000497954 479 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 GTF2IP9-201ENST00000502460 301 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC1.93□□□□□ -2.1
SDCBPO00560 MTND3P24-201ENST00000506306 329 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SDCBPO00560 CBX3P3-201ENST00000508108 532 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SDCBPO00560 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC1.93□□□□□ -2.1
SDCBPO00560 ACTR3BP3-201ENST00000565577 979 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 MYL12BP1-201ENST00000569826 507 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.93□□□□□ -2.1
SDCBPO00560 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.93□□□□□ -2.1
SDCBPO00560 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.93□□□□□ -2.1
SDCBPO00560 AC008739.2-201ENST00000597006 317 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 U73023.1-201ENST00000603134 700 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 DPRXP5-201ENST00000604662 539 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AL161734.1-201ENST00000609720 557 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC1.93□□□□□ -2.1
SDCBPO00560 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.93□□□□□ -2.1
SDCBPO00560 AL590396.2-201ENST00000636511 1041 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 MTND2P41-201ENST00000637599 773 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AC016717.2-201ENST00000609089 5141 ntBASIC1.93□□□□□ -2.1
SDCBPO00560 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
SDCBPO00560 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SDCBPO00560 AL136360.1-201ENST00000503377 1900 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 CKAP2P1-201ENST00000555477 2049 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SDCBPO00560 RNU6-525P-201ENST00000363685 104 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 RNA5SP27-201ENST00000363839 119 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 RNU6-921P-201ENST00000384361 107 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 MTND4LP20-201ENST00000402379 270 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AL589655.1-201ENST00000405398 482 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 RNU6-712P-201ENST00000410558 100 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 RN7SKP140-201ENST00000411196 284 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AL513477.1-202ENST00000417061 214 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.92□□□□□ -2.1
SDCBPO00560 MTND4P24-201ENST00000424002 397 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AL355994.1-201ENST00000424379 260 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AL035410.1-201ENST00000427409 427 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 WARS2P1-201ENST00000429678 537 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 ZNF965P-201ENST00000432501 817 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.92□□□□□ -2.1
SDCBPO00560 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.92□□□□□ -2.1
SDCBPO00560 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC1.92□□□□□ -2.1
SDCBPO00560 MTND2P6-201ENST00000455337 1030 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.92□□□□□ -2.1
SDCBPO00560 RN7SL636P-201ENST00000497504 294 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 GZMAP1-201ENST00000503054 631 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.92□□□□□ -2.1
SDCBPO00560 PRELID3BP4-201ENST00000515476 571 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AP001646.1-201ENST00000527936 915 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.92□□□□□ -2.1
SDCBPO00560 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.92□□□□□ -2.1
SDCBPO00560 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC1.92□□□□□ -2.1
SDCBPO00560 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.92□□□□□ -2.1
SDCBPO00560 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.92□□□□□ -2.1
SDCBPO00560 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.92□□□□□ -2.1
SDCBPO00560 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC1.92□□□□□ -2.1
SDCBPO00560 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
SDCBPO00560 AC022069.1-201ENST00000582910 658 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.92□□□□□ -2.1
SDCBPO00560 AC012669.1-201ENST00000603209 283 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AC103810.6-201ENST00000606708 136 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AC016542.1-201ENST00000608259 493 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AL138880.2-201ENST00000616214 239 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 AL049780.3-201ENST00000624612 1583 ntBASIC1.92□□□□□ -2.1
SDCBPO00560 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SDCBPO00560 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
SDCBPO00560 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SDCBPO00560 MTND5P31-201ENST00000419366 1374 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 AC111188.2-201ENST00000529697 1387 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SDCBPO00560 RNU6-1074P-201ENST00000383995 104 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 SNORA1.3-201ENST00000384676 136 ntBASIC1.91□□□□□ -2.1
SDCBPO00560 RPS4XP7-201ENST00000406274 780 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms