Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.85□□□□□ -2.11
CACNA1AO00555 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CACNA1AO00555 AC068700.1-201ENST00000565862 3754 ntBASIC1.85□□□□□ -2.11
CACNA1AO00555 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
CACNA1AO00555 AC100821.1-201ENST00000523153 2479 ntBASIC1.84□□□□□ -2.11
CACNA1AO00555 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.84□□□□□ -2.11
CACNA1AO00555 AC007390.1-201ENST00000415722 356 ntBASIC1.84□□□□□ -2.11
CACNA1AO00555 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC1.84□□□□□ -2.11
CACNA1AO00555 VWA8P1-201ENST00000510889 176 ntBASIC1.84□□□□□ -2.11
CACNA1AO00555 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.84□□□□□ -2.11
CACNA1AO00555 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.84□□□□□ -2.11
CACNA1AO00555 AL451049.1-201ENST00000608672 497 ntBASIC1.84□□□□□ -2.11
CACNA1AO00555 Y_RNA.783-201ENST00000613546 102 ntBASIC1.84□□□□□ -2.11
CACNA1AO00555 AL122125.1-201ENST00000616999 600 ntBASIC1.84□□□□□ -2.11
CACNA1AO00555 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
CACNA1AO00555 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CACNA1AO00555 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.84□□□□□ -2.11
CACNA1AO00555 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.84□□□□□ -2.11
CACNA1AO00555 AC093831.2-201ENST00000624393 3427 ntBASIC1.84□□□□□ -2.12
CACNA1AO00555 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC1.84□□□□□ -2.12
CACNA1AO00555 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.84□□□□□ -2.12
CACNA1AO00555 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.84□□□□□ -2.12
CACNA1AO00555 FGF7P3-201ENST00000454645 303 ntBASIC1.84□□□□□ -2.12
CACNA1AO00555 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC1.84□□□□□ -2.12
CACNA1AO00555 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC1.84□□□□□ -2.12
CACNA1AO00555 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.84□□□□□ -2.12
CACNA1AO00555 BX664608.1-201ENST00000610519 487 ntBASIC1.84□□□□□ -2.12
CACNA1AO00555 MIR8081-201ENST00000611533 95 ntBASIC1.84□□□□□ -2.12
CACNA1AO00555 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.84□□□□□ -2.12
CACNA1AO00555 AL021368.2-201ENST00000606125 5352 ntBASIC1.84□□□□□ -2.12
CACNA1AO00555 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.12
CACNA1AO00555 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
CACNA1AO00555 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.83□□□□□ -2.12
CACNA1AO00555 AC090229.1-201ENST00000590983 1609 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC1.83□□□□□ -2.12
CACNA1AO00555 AC008173.1-201ENST00000418901 264 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1AO00555 RPL23AP74-201ENST00000437246 471 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.83□□□□□ -2.12
CACNA1AO00555 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1AO00555 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1AO00555 MTATP6P3-201ENST00000581686 676 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 AC006116.7-201ENST00000590141 756 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 BNIP3P26-201ENST00000600827 554 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 AC091895.1-201ENST00000624494 256 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 MKKS-204ENST00000639674 192 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CACNA1AO00555 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.83□□□□□ -2.12
CACNA1AO00555 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.83□□□□□ -2.12
CACNA1AO00555 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.83□□□□□ -2.12
CACNA1AO00555 AL513175.2-201ENST00000422071 443 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1AO00555 TMEM248P1-201ENST00000510579 951 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 MIR2114-201ENST00000516645 80 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC1.83□□□□□ -2.12
CACNA1AO00555 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.83□□□□□ -2.12
CACNA1AO00555 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.83□□□□□ -2.12
CACNA1AO00555 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC1.83□□□□□ -2.12
CACNA1AO00555 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.83□□□□□ -2.12
CACNA1AO00555 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CACNA1AO00555 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CACNA1AO00555 ANKRD18EP-201ENST00000405487 2632 ntBASIC1.83□□□□□ -2.12
CACNA1AO00555 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.83□□□□□ -2.12
CACNA1AO00555 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
CACNA1AO00555 AC116158.1-201ENST00000560231 2129 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.82□□□□□ -2.12
CACNA1AO00555 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CACNA1AO00555 Y_RNA.488-201ENST00000384403 102 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 RNU6-30P-201ENST00000384561 107 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 POLHP1-201ENST00000411806 470 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 BNIP3P2-201ENST00000441221 577 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 RPL23AP20-201ENST00000447965 421 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 MTND1P18-201ENST00000448191 573 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.82□□□□□ -2.12
CACNA1AO00555 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC1.82□□□□□ -2.12
CACNA1AO00555 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.82□□□□□ -2.12
CACNA1AO00555 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.82□□□□□ -2.12
CACNA1AO00555 MZT1P2-201ENST00000604387 248 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.82□□□□□ -2.12
CACNA1AO00555 AC093909.5-201ENST00000621839 1799 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CACNA1AO00555 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CACNA1AO00555 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC1.82□□□□□ -2.12
CACNA1AO00555 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.82□□□□□ -2.12
CACNA1AO00555 Y_RNA.700-201ENST00000516806 100 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 AL008729.2-201ENST00000606393 473 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 AC010678.1-201ENST00000614118 713 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 AC008121.3-201ENST00000618726 433 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 RPL23AP61-201ENST00000623642 466 ntBASIC1.82□□□□□ -2.12
CACNA1AO00555 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC1.82□□□□□ -2.12
CACNA1AO00555 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CACNA1AO00555 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC1.82□□□□□ -2.12
CACNA1AO00555 Y_RNA.142-201ENST00000363491 102 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 LAP3P1-201ENST00000403648 294 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 RNA5SP129-201ENST00000410276 118 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 AL354695.1-201ENST00000427935 228 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 RNU11-2P-201ENST00000516898 142 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 AL132857.1-201ENST00000555180 708 ntBASIC1.81□□□□□ -2.12
CACNA1AO00555 AC023825.1-201ENST00000566704 1030 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms