Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXN3O00409 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
FOXN3O00409 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN3O00409 AC024560.2-201ENST00000507981 1497 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 U8.3-201ENST00000363321 132 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 RNU2-43P-201ENST00000410306 190 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AC127391.1-201ENST00000411737 98 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 MTND1P23-201ENST00000416931 372 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 MTND4LP11-201ENST00000422184 280 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 USP9YP36-201ENST00000424581 829 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 PGBD4P3-201ENST00000440731 581 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AL121871.1-201ENST00000443413 436 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 GAPDHP17-201ENST00000449858 1001 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AL451050.1-201ENST00000450126 415 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 UBDP1-202ENST00000457888 382 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
FOXN3O00409 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXN3O00409 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 AC114797.1-201ENST00000514003 728 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 RNU6-1073P-201ENST00000517182 106 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 MTND4LP26-201ENST00000518144 282 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 MRPL49P2-201ENST00000521066 465 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXN3O00409 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 AC087883.1-201ENST00000551882 391 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 MIR3682-201ENST00000581338 84 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.27□□□□□ -1.73
FOXN3O00409 AP003465.2-201ENST00000602571 373 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AC110741.2-201ENST00000605278 268 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AL133173.2-201ENST00000614270 90 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AC091834.1-201ENST00000614543 472 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AC015967.1-201ENST00000619893 476 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AC009268.2-201ENST00000621925 457 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 MIR4727-201ENST00000622232 55 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.27□□□□□ -1.73
FOXN3O00409 AC048347.1-201ENST00000624621 427 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 AL157700.1-201ENST00000561973 1432 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 AF127577.6-201ENST00000623352 2191 ntBASIC4.27□□□□□ -1.73
FOXN3O00409 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.27□□□□□ -1.73
FOXN3O00409 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN3O00409 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN3O00409 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
FOXN3O00409 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
FOXN3O00409 RNU6-600P-201ENST00000362524 99 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 MIR19A-201ENST00000384878 82 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 HSPE1P26-201ENST00000405341 275 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 RPS3AP24-201ENST00000407896 734 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.26□□□□□ -1.73
FOXN3O00409 RNU2-66P-201ENST00000410650 161 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN3O00409 AL356095.1-201ENST00000417217 199 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN3O00409 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN3O00409 HMGB1P37-201ENST00000439613 609 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.26□□□□□ -1.73
FOXN3O00409 RPL21P133-201ENST00000443666 476 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC093899.1-201ENST00000457984 376 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXN3O00409 RPL23AP62-201ENST00000463396 453 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 SNRPGP3-201ENST00000469405 227 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC026979.1-201ENST00000492525 396 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 RPL23AP55-201ENST00000498163 452 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.26□□□□□ -1.73
FOXN3O00409 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN3O00409 KLHL2P1-201ENST00000508691 521 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 CDC42P4-201ENST00000510507 563 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC026726.1-201ENST00000512859 601 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN3O00409 HMGN1P28-201ENST00000521340 364 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC107934.1-201ENST00000522215 217 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC4.26□□□□□ -1.73
FOXN3O00409 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.26□□□□□ -1.73
FOXN3O00409 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
FOXN3O00409 AC016957.1-201ENST00000534895 309 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN3O00409 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN3O00409 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.26□□□□□ -1.73
FOXN3O00409 ZNF192P1-203ENST00000565888 810 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 MIR3146-201ENST00000580367 79 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 MIR3118-1-201ENST00000581787 76 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.26□□□□□ -1.73
FOXN3O00409 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.26□□□□□ -1.73
FOXN3O00409 NDUFA8P1-201ENST00000605525 367 ntBASIC4.26□□□□□ -1.73
FOXN3O00409 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.26□□□□□ -1.73
FOXN3O00409 AC004908.2-201ENST00000609090 574 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms