Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC083875.1-201ENST00000419509 405 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 BX119904.4-201ENST00000424402 301 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC28A1O00337 HIGD1AP11-201ENST00000438361 280 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AC122718.1-201ENST00000439448 744 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC28A1O00337 RPL26P6-201ENST00000440913 438 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC28A1O00337 AL133547.1-201ENST00000448546 220 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC28A1O00337 RSL24D1P3-201ENST00000449255 495 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC28A1O00337 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC28A1O00337 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.13□□□□□ -1.91
SLC28A1O00337 RPL30P9-201ENST00000465586 330 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 HMGN2P13-201ENST00000476476 274 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC28A1O00337 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC28A1O00337 AC093663.1-201ENST00000497190 394 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SLC28A1O00337 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC28A1O00337 AC109464.2-201ENST00000510242 943 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AL359273.1-201ENST00000510918 627 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.13□□□□□ -1.91
SLC28A1O00337 DUXAP1-201ENST00000556632 463 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC28A1O00337 MIR3921-201ENST00000577308 85 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 MIR4276-201ENST00000584832 70 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AC105224.1-201ENST00000587055 421 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AL391001.1-201ENST00000602747 715 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AL162713.1-201ENST00000604480 262 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AL136981.2-201ENST00000617319 734 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AC091046.2-201ENST00000620775 665 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AC006111.3-201ENST00000622137 383 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AC008443.7-201ENST00000622195 246 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AP002782.1-201ENST00000623107 614 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 CR392039.5-201ENST00000623201 510 ntBASIC3.13□□□□□ -1.91
SLC28A1O00337 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.13□□□□□ -1.91
SLC28A1O00337 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
SLC28A1O00337 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC005832.2-201ENST00000538921 1430 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC021755.1-201ENST00000559747 1447 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 Z83843.1-201ENST00000604070 3685 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SLC28A1O00337 MIR148B-201ENST00000362252 99 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 RNU6-744P-201ENST00000365557 107 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC28A1O00337 RNU6-157P-201ENST00000383957 107 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 RNU6-1316P-201ENST00000384242 108 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 MIR1290-201ENST00000408735 78 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC28A1O00337 MTND2P9-201ENST00000422293 931 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 TMEM167AP1-201ENST00000423409 219 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SLC28A1O00337 TXNL1P1-201ENST00000429528 554 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC018644.1-201ENST00000429934 551 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 OR4K11P-201ENST00000431829 904 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC090774.1-201ENST00000435925 246 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC28A1O00337 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 ARPC3P2-201ENST00000457786 533 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC021382.1-201ENST00000483523 359 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 HMGB1P36-201ENST00000487709 576 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC28A1O00337 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC28A1O00337 RNU5A-4P-201ENST00000516588 111 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC105185.1-201ENST00000518705 535 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC245166.1-201ENST00000521012 253 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC28A1O00337 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC125611.2-201ENST00000551907 647 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC061975.8-201ENST00000587058 721 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.12□□□□□ -1.91
SLC28A1O00337 AC092106.3-201ENST00000611308 722 ntBASIC3.12□□□□□ -1.91
SLC28A1O00337 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.12□□□□□ -1.91
SLC28A1O00337 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.12□□□□□ -1.91
SLC28A1O00337 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.12□□□□□ -1.91
SLC28A1O00337 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
SLC28A1O00337 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
SLC28A1O00337 AC092447.10-201ENST00000620607 1652 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC28A1O00337 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC28A1O00337 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
SLC28A1O00337 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
SLC28A1O00337 RNU6-462P-201ENST00000362659 105 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RNA5SP50-201ENST00000363731 107 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RNU6-777P-201ENST00000364265 104 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RNU6-1078P-201ENST00000364522 103 ntBASIC3.11□□□□□ -1.91
SLC28A1O00337 RNU6-76P-201ENST00000384060 104 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms