Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC188H7C350 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC188H7C350 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC188H7C350 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC188H7C350 RNU5A-1-201ENST00000362698 116 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 RNU6-1214P-201ENST00000363650 109 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC188H7C350 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AL136372.1-201ENST00000403060 228 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 MTCO1P17-201ENST00000411522 491 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC007390.1-201ENST00000415722 356 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 RPL21P32-201ENST00000419877 477 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AL389915.1-201ENST00000422463 466 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 RPL7P2-201ENST00000427639 268 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 TXNL1P1-201ENST00000429528 554 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC112653.1-201ENST00000443851 386 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC073387.1-201ENST00000453261 709 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 SNORA84-201ENST00000459229 133 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC188H7C350 RPS27AP1-201ENST00000475545 471 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 RPL7P23-201ENST00000493874 747 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC106872.3-201ENST00000495104 446 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC093809.1-201ENST00000509155 340 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC188H7C350 RN7SKP18-201ENST00000516005 275 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC188H7C350 ELOCP32-201ENST00000548625 324 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC125611.2-201ENST00000551907 647 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC005476.1-201ENST00000554427 397 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.44□□□□□ -1.86
CCDC188H7C350 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 AC072039.2-201ENST00000608883 439 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AL390240.1-201ENST00000612950 384 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AL110115.1-201ENST00000614396 364 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC021755.4-201ENST00000616620 456 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC002076.2-201ENST00000617362 122 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AL356863.1-201ENST00000623378 1080 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC127502.3-201ENST00000636170 1206 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.44□□□□□ -1.86
CCDC188H7C350 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC188H7C350 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CCDC188H7C350 ZNF826P-207ENST00000622273 1910 ntBASIC3.44□□□□□ -1.86
CCDC188H7C350 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
CCDC188H7C350 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC188H7C350 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC188H7C350 RNA5SP119-201ENST00000362715 117 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 RN7SKP280-201ENST00000364196 304 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC188H7C350 MIR554-201ENST00000384874 96 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC188H7C350 FAT1P1-201ENST00000406588 507 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 RNA5SP229-201ENST00000410809 99 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC188H7C350 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC188H7C350 AL035423.1-201ENST00000420331 213 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 RPL7L1P10-201ENST00000427790 463 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 UBE2V1P13-201ENST00000436983 439 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 LSM1P1-201ENST00000438629 273 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC188H7C350 RPS29P7-201ENST00000439662 171 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AL591503.2-201ENST00000442314 1005 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC188H7C350 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AC034222.1-201ENST00000494052 532 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CCDC188H7C350 AL359273.1-201ENST00000510918 627 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 SAP18P1-201ENST00000512058 390 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 RNU6-840P-201ENST00000517275 65 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 ERHP1-201ENST00000523006 310 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AC022690.1-201ENST00000526681 550 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC188H7C350 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.43□□□□□ -1.86
CCDC188H7C350 TRAV37-201ENST00000553906 342 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.43□□□□□ -1.86
CCDC188H7C350 AC034268.2-201ENST00000571784 482 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AC022916.3-201ENST00000592961 742 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AL355816.2-201ENST00000610049 647 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AC079395.3-201ENST00000615161 484 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AL450472.3-201ENST00000615578 367 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AC079597.1-201ENST00000624306 508 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 AL159972.1-201ENST00000625150 448 ntBASIC3.43□□□□□ -1.86
CCDC188H7C350 OR8B1P-202ENST00000641132 1178 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms