Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 MIR502-201ENST00000606349 86 ntBASIC1.47□□□□□ -2.17
CPSF4LA6NMK7 AC090897.3-201ENST00000636973 1157 ntBASIC1.47□□□□□ -2.17
CPSF4LA6NMK7 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC006026.1-201ENST00000444025 1803 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 UBE2L2-201ENST00000254302 429 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AL356292.1-201ENST00000283110 373 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 MIR504-201ENST00000385065 83 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AL589994.1-201ENST00000404962 340 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 RNU2-17P-201ENST00000410290 190 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 RNU6-1077P-201ENST00000410506 102 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 EI24P1-201ENST00000416584 867 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AL512661.1-201ENST00000434586 1253 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 LSM1P1-201ENST00000438629 273 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 SSXP1-201ENST00000453640 473 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 NF1P3-201ENST00000457709 450 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 SNORD121B-201ENST00000458838 81 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 LDHBP3-201ENST00000514909 822 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 NRBF2P1-201ENST00000587407 859 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC010928.2-201ENST00000588017 287 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 HMGN2P28-201ENST00000606102 262 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC010678.1-201ENST00000614118 713 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 AC116618.1-201ENST00000634617 774 ntBASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC1.46□□□□□ -2.18
CPSF4LA6NMK7 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 MTND5P3-201ENST00000438536 1800 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 RNU6-1180P-201ENST00000364935 107 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 RNU6-356P-201ENST00000384140 107 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 RPS3AP26-201ENST00000398259 784 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 RNU2-71P-201ENST00000411395 189 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 POLHP1-201ENST00000411806 470 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 NAP1L4P3-201ENST00000432820 1147 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 OR10R1P-201ENST00000441524 1141 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC069277.2-201ENST00000454211 432 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 USP9YP10-201ENST00000454868 628 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 MRPL42P6-201ENST00000486397 371 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC009901.1-201ENST00000506703 541 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 MTATP6P22-201ENST00000507369 598 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC093755.1-201ENST00000512950 1023 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 RPPH1-2P-201ENST00000516688 293 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 RN7SKP82-201ENST00000516786 223 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 snoZ278.1-201ENST00000517059 112 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 CBX3P4-201ENST00000538909 354 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC245128.3-201ENST00000594721 748 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AP004247.3-201ENST00000608682 624 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AC068831.7-201ENST00000616954 363 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 HPVC1-201ENST00000629899 1198 ntBASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
CPSF4LA6NMK7 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AL354685.2-201ENST00000448218 1447 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RNA5SP27-201ENST00000363839 119 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RNA5SP105-201ENST00000391123 113 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 ZNF90P2-204ENST00000419323 1075 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RPS29P12-201ENST00000460178 152 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 HMGN1P8-201ENST00000463578 288 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RPL7P18-201ENST00000478965 734 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RPL23AP70-201ENST00000483361 460 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 SNORA25.15-201ENST00000516487 89 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RNU2-44P-201ENST00000516795 194 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RNU6-295P-201ENST00000516901 104 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 RNU6-943P-201ENST00000516960 98 ntBASIC1.44□□□□□ -2.18
CPSF4LA6NMK7 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms