Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 VN1R85P-201ENST00000601587 426 ntBASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 AC079587.1-201ENST00000603846 277 ntBASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 ARF4P1-201ENST00000605447 541 ntBASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 AC004696.1-201ENST00000614345 607 ntBASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 AC010133.1-201ENST00000615809 842 ntBASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 AL445567.2-201ENST00000618935 498 ntBASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 EEF1A1P42-201ENST00000613436 1331 ntBASIC3.95□□□□□ -1.78
MBD3L4A6NDZ8 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC067945.1-201ENST00000342609 618 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RNU6-534P-201ENST00000364877 106 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RNU4-48P-201ENST00000365559 182 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RNU6-701P-201ENST00000384059 107 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 SNORA70C-201ENST00000384538 135 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 MIR607-201ENST00000385241 96 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RNU6-1158P-201ENST00000391167 107 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 MIR921-201ENST00000401133 56 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 SNORA11F-201ENST00000408237 128 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 Z74021.1-201ENST00000423610 407 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AL353572.1-201ENST00000442490 417 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 DDX3P2-201ENST00000446138 111 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 NUTF2P3-201ENST00000448540 384 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RPS27AP17-201ENST00000463344 455 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 UQCRHP4-201ENST00000471686 272 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC126389.1-201ENST00000477436 290 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC091167.1-201ENST00000492017 396 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC116353.2-201ENST00000505332 712 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 PRDX4P1-201ENST00000507189 574 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 SNORD27.1-201ENST00000516319 72 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 OR5AL2P-201ENST00000532185 920 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 NCAPGP2-201ENST00000557911 754 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC005951.2-201ENST00000576282 495 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 ZYXP1-201ENST00000617638 118 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 YWHAEP7-203ENST00000622054 312 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC093648.1-201ENST00000623546 606 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AC140479.6-201ENST00000633535 357 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 NEAT1-202ENST00000501122 22743 ntBASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.94□□□□□ -1.78
MBD3L4A6NDZ8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 AC116667.1-201ENST00000604855 2072 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RNU6-179P-201ENST00000363350 107 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RNA5SP28-201ENST00000363841 119 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RNA5SP189-201ENST00000364920 115 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RNU1-64P-201ENST00000365443 163 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 SNORA69-201ENST00000383895 132 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RNU6-606P-201ENST00000384721 111 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 MIR454-201ENST00000390180 115 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RN7SKP285-201ENST00000410137 318 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RPL23AP26-201ENST00000412728 464 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 SNRPFP1-201ENST00000414761 252 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 OR51A5P-201ENST00000415429 942 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 RPL21P91-201ENST00000429231 479 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 SEPT14P3-201ENST00000439401 183 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 AC016691.1-201ENST00000441321 413 ntBASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.93□□□□□ -1.78
MBD3L4A6NDZ8 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms