Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.3□□□□□ -1.88
CCDC162PA2VCL2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AL049781.1-201ENST00000623195 3585 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 MTND4P13-201ENST00000402078 1023 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AL356131.1-201ENST00000405826 414 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 OR1AA1P-201ENST00000419597 916 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 HMGN2P20-201ENST00000437531 273 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 HIGD1AP11-201ENST00000438361 280 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 MTND5P14-201ENST00000441481 1267 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 ST13P14-201ENST00000474095 734 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC021678.1-201ENST00000505195 936 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC023538.1-201ENST00000534576 736 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 MTCO3P24-201ENST00000572729 782 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AL596327.1-201ENST00000603629 213 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AL136981.2-201ENST00000617319 734 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 AL360181.4-201ENST00000621752 134 ntBASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.29□□□□□ -1.88
CCDC162PA2VCL2 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC004972.1-201ENST00000623934 2209 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 RNU6-28P-201ENST00000362378 107 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 SNORD56.3-201ENST00000363507 71 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 RNU6-1214P-201ENST00000363650 109 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 RNU1-33P-201ENST00000364249 162 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 SNORA26.7-201ENST00000391288 122 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 RNU2-47P-201ENST00000410649 186 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 BMS1P22-201ENST00000414726 313 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 DUTP6-201ENST00000425573 462 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC079780.1-201ENST00000428259 207 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AL159987.2-201ENST00000432754 307 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AL591719.1-201ENST00000444669 744 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC002381.1-201ENST00000447049 280 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 SSXP4-201ENST00000451349 245 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 CYCSP35-201ENST00000451978 304 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 MEMO1P3-201ENST00000459811 302 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AP002812.1-201ENST00000495378 474 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC147055.4-201ENST00000504399 745 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC093281.2-201ENST00000510153 597 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 MTCO2P32-201ENST00000514865 403 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 MIR1254-2-201ENST00000579553 63 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC021755.4-201ENST00000616620 456 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.28□□□□□ -1.88
CCDC162PA2VCL2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCDC162PA2VCL2 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CCDC162PA2VCL2 AF117829.1-206ENST00000621883 3802 ntBASIC3.27□□□□□ -1.89
CCDC162PA2VCL2 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.27□□□□□ -1.89
CCDC162PA2VCL2 RNU6-1074P-201ENST00000383995 104 ntBASIC3.27□□□□□ -1.89
CCDC162PA2VCL2 MIR449B-201ENST00000384995 97 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms