Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC112230.1-201ENST00000604342 547 ntBASIC4.83□□□□□ -1.64
CCDC66A2RUB6 AL158211.4-201ENST00000606988 584 ntBASIC4.83□□□□□ -1.64
CCDC66A2RUB6 AC010338.1-201ENST00000621823 717 ntBASIC4.83□□□□□ -1.64
CCDC66A2RUB6 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.83□□□□□ -1.64
CCDC66A2RUB6 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CCDC66A2RUB6 AL391684.1-202ENST00000641293 1636 ntBASIC4.83□□□□□ -1.64
CCDC66A2RUB6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CCDC66A2RUB6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 DHX40P1-201ENST00000588725 1412 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 HSPA8P1-201ENST00000425843 1833 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNU6-223P-201ENST00000362830 107 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNU5E-8P-201ENST00000363502 116 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 Y_RNA.157-201ENST00000363638 102 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNA5SP151-201ENST00000365632 117 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNU6-606P-201ENST00000384721 111 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AL354719.1-201ENST00000406535 843 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 MIR1250-201ENST00000408098 113 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNU6-1068P-201ENST00000410958 103 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNU6-373P-201ENST00000411247 98 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AC140479.3-201ENST00000418944 1126 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 NRBF2P3-201ENST00000432731 865 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 DDX3P2-201ENST00000446138 111 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 OR1H1P-201ENST00000448731 937 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AL356010.1-201ENST00000456364 102 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNU7-59P-201ENST00000459101 61 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RPS3AP41-201ENST00000462701 778 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 ST13P14-201ENST00000474095 734 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 HSPD1P15-201ENST00000505573 1122 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 PCBP2P3-201ENST00000509726 843 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNA5SP401-201ENST00000515920 127 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RNU6-798P-201ENST00000516912 103 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AP000857.1-201ENST00000532151 543 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AC123904.3-201ENST00000547218 814 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RPL21P12-201ENST00000559810 515 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AC103710.2-201ENST00000609912 942 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AC091905.2-201ENST00000623143 306 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AL359697.1-201ENST00000624879 587 ntBASIC4.82□□□□□ -1.64
CCDC66A2RUB6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CCDC66A2RUB6 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 ZNF33CP-201ENST00000432492 2030 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 MIR423-201ENST00000362201 94 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 U3.11-201ENST00000364476 212 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 RNU6-1078P-201ENST00000364522 103 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 Y_RNA.813-201ENST00000364639 102 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 RNU6-278P-201ENST00000390945 109 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 RSU1P3-201ENST00000412878 835 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 COX6B1P1-201ENST00000415962 213 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 MTCO3P12-201ENST00000416718 547 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 CHIAP3-201ENST00000423668 1133 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 RPL23AP25-201ENST00000430973 463 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 RPS20P5-201ENST00000434808 360 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC093019.1-201ENST00000443135 252 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 RPS17P13-201ENST00000448974 407 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 RPS27AP17-201ENST00000463344 455 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC233702.1-201ENST00000482905 502 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC010486.1-201ENST00000511793 424 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 CDH12P4-201ENST00000517835 295 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 CDH12P3-201ENST00000517935 295 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 CDH12P1-201ENST00000518435 295 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC021006.3-201ENST00000530771 192 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 MGST1-215ENST00000540056 546 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC007424.1-203ENST00000554613 687 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AP003117.2-201ENST00000606010 545 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AL354950.2-201ENST00000617939 290 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC244100.1-202ENST00000621554 382 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 NXPH1-205ENST00000602349 1953 ntBASIC4.81□□□□□ -1.64
CCDC66A2RUB6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.81□□□□□ -1.64
CCDC66A2RUB6 AC108467.2-201ENST00000617640 1597 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms