Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 OR5D17P-201ENST00000531492 978 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 OR8R1P-201ENST00000543943 764 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 HSPE1P5-201ENST00000561489 272 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 MIR5685-201ENST00000579080 79 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC007448.1-201ENST00000582714 234 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PIGPP4-201ENST00000584447 307 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL590229.1-201ENST00000603497 542 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 PRELID3BP8-201ENST00000604148 295 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC011451.2-201ENST00000604303 598 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 Z94722.1-201ENST00000604328 474 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL031775.1-201ENST00000607014 887 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC092653.1-201ENST00000608509 531 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC026422.1-201ENST00000623961 452 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AL133383.2-201ENST00000622958 2336 ntBASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AC009902.3-201ENST00000606235 2172 ntBASIC3.15□□□□□ -1.9
TRBV4-1A0A0J9YWV2 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRBV4-1A0A0J9YWV2 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TRBV4-1A0A0J9YWV2 AP001148.1-201ENST00000624124 2359 ntBASIC3.15□□□□□ -1.9
TRBV4-1A0A0J9YWV2 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNY4P24-201ENST00000362735 96 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-1074P-201ENST00000383995 104 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU6-1181P-201ENST00000384191 106 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 U3.20-201ENST00000390909 217 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNA5SP107-201ENST00000411358 122 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ATP5A1P2-201ENST00000412323 255 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 Z99755.1-201ENST00000414048 380 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC009237.5-201ENST00000414271 501 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC093578.1-201ENST00000415219 368 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RSL24D1P6-201ENST00000426934 401 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC112653.1-201ENST00000443851 386 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC009220.1-201ENST00000451614 275 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC073387.1-201ENST00000453261 709 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTND1P9-201ENST00000453775 944 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPL23AP67-201ENST00000465341 474 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC093278.1-201ENST00000494700 600 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR2116-201ENST00000517221 80 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 HIGD1AP10-201ENST00000527837 282 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC004024.1-201ENST00000549244 247 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR4K8P-201ENST00000578842 1048 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL031985.2-201ENST00000600955 480 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR2AS2P-201ENST00000606902 342 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC091965.4-201ENST00000607691 587 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC012360.2-201ENST00000609349 391 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TUG1_1.1-201ENST00000610654 145 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MIR378J-201ENST00000611988 109 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 MTND5P33-201ENST00000571250 1450 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ELL2P3-201ENST00000457883 1602 ntBASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.15□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 FRG1BP-201ENST00000278882 761 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RNU4-40P-201ENST00000364351 143 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 SNORA51.2-201ENST00000364595 132 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL359704.1-201ENST00000411586 781 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC126124.2-201ENST00000413542 321 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 RPS15AP6-201ENST00000420703 385 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 CYCSP46-201ENST00000423569 204 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 DUTP6-201ENST00000425573 462 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 C4BPAP2-201ENST00000428434 478 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC098826.1-201ENST00000433943 471 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC129850.1-201ENST00000436203 508 ntBASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.14□□□□□ -1.91
TRBV4-1A0A0J9YWV2 AC092754.2-201ENST00000463506 460 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms