Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 RNU2-25P-201ENST00000411041 191 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 NDUFA5P10-201ENST00000432147 357 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 RABEPKP1-201ENST00000440529 1026 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 BUD31P2-201ENST00000449374 300 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AL118520.1-201ENST00000450770 291 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 HMGB1P15-201ENST00000453854 435 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC017007.3-201ENST00000479865 435 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 RNU6-295P-201ENST00000516901 104 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 OSBPL9P3-201ENST00000534523 595 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC087241.2-201ENST00000535801 324 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 ACTR3BP3-201ENST00000565577 979 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 MYL12BP1-201ENST00000569826 507 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AC120053.1-201ENST00000607706 736 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AL450472.3-201ENST00000615578 367 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AL353997.5-201ENST00000618886 171 ntBASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.89□□□□□ -2.11
TRAV17A0A0B4J275 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 PABPC1P9-201ENST00000426076 1612 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 RNU6-799P-201ENST00000363567 107 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 MIR583-201ENST00000384846 75 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 SNORA26.9-201ENST00000391322 122 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 RPS26P56-201ENST00000444468 240 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AL035407.2-201ENST00000454090 378 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 snoU13.3-201ENST00000459441 104 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AC109486.1-201ENST00000486833 374 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AC117522.2-201ENST00000510049 657 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 RNA5SP82-201ENST00000516707 92 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 TPMTP1-201ENST00000592307 737 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AL133507.1-201ENST00000605269 557 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 AC013562.2-201ENST00000611632 603 ntBASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV17A0A0B4J275 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 RNU6-50P-201ENST00000362356 103 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 RNU6-1181P-201ENST00000384191 106 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 SNORA80E-201ENST00000384744 137 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 U8.13-201ENST00000390842 128 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC234782.4-201ENST00000417646 1048 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 SNRPEP4-201ENST00000435815 279 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC104689.1-201ENST00000473356 768 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC023424.2-201ENST00000493479 777 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC135721.1-201ENST00000497954 479 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 MTND4P2-201ENST00000507767 1203 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC020895.1-201ENST00000595362 272 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AL161734.1-201ENST00000609720 557 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC007275.1-201ENST00000621243 671 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AC099063.3-201ENST00000642066 185 ntBASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV17A0A0B4J275 AL359893.1-201ENST00000447628 1580 ntBASIC1.86□□□□□ -2.11
TRAV17A0A0B4J275 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms