Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL031119.1-201ENST00000404707 1879 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RNU5E-8P-201ENST00000363502 116 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 Y_RNA.212-201ENST00000364177 102 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RNU1-13P-201ENST00000384499 162 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RNU6-907P-201ENST00000390924 102 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL606923.1-201ENST00000406616 190 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RNA5SP317-201ENST00000410176 116 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RN7SKP158-201ENST00000410453 326 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RNA5SP311-201ENST00000411290 116 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 OR6C66P-201ENST00000414917 930 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 SNRPEP4-201ENST00000435815 279 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL138799.3-201ENST00000438968 350 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 TDGF1P1-201ENST00000445734 527 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RPL7P52-201ENST00000449200 742 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RPS4XP10-201ENST00000465034 731 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC090602.1-201ENST00000469695 252 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL049874.2-201ENST00000492636 288 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC093767.1-201ENST00000504523 156 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RNA5SP315-201ENST00000516340 116 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RNA5SP312-201ENST00000517068 116 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 Y_RNA.720-201ENST00000517166 92 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC105031.1-201ENST00000518550 476 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 SNRPGP18-201ENST00000553000 214 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC034105.4-201ENST00000568304 277 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC006363.1-201ENST00000603806 463 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL592436.1-201ENST00000605135 558 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL591034.3-201ENST00000605511 685 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC019193.3-201ENST00000609144 554 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC008785.1-201ENST00000624475 456 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AC010300.1-201ENST00000600671 5134 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 AL606537.1-201ENST00000607258 2011 ntBASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HCFC2Q9Y5Z7 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AL122126.1-201ENST00000546905 1318 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 Y_RNA.28-201ENST00000362554 111 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 Y_RNA.112-201ENST00000363250 102 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 RNU1-130P-201ENST00000363930 160 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 Y_RNA.373-201ENST00000365600 103 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 RNU6-196P-201ENST00000384315 107 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 MIR19A-201ENST00000384878 82 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AL445189.1-201ENST00000405722 338 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 PMCHL1-202ENST00000423102 261 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 RPL21P89-201ENST00000444021 467 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC107399.1-201ENST00000451226 265 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 MTND1P9-201ENST00000453775 944 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 RNU7-180P-201ENST00000459240 63 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC034236.1-201ENST00000469891 373 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 IGKV2-23-201ENST00000518729 323 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AP001804.3-201ENST00000525146 880 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC063950.1-201ENST00000552036 308 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 RN7SL176P-201ENST00000580352 264 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC100830.2-201ENST00000581636 240 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC245389.1-201ENST00000605141 529 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 uc_338.22-201ENST00000622722 187 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC034229.5-201ENST00000624258 185 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 TTK-211ENST00000627129 240 ntTSL 5 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 AC066616.2-201ENST00000559334 1481 ntBASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.79□□□□□ -1.64
HCFC2Q9Y5Z7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCFC2Q9Y5Z7 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCFC2Q9Y5Z7 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCFC2Q9Y5Z7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
HCFC2Q9Y5Z7 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HCFC2Q9Y5Z7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HCFC2Q9Y5Z7 RNU6-511P-201ENST00000363496 107 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms