Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 MIR6076-201ENST00000617521 113 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AL021368.2-201ENST00000606125 5352 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 AC110774.1-201ENST00000623567 2018 ntBASIC3.43□□□□□ -1.86
PCDHGA1Q9Y5H4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AL356274.2-201ENST00000624379 3752 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AP000568.1-201ENST00000282964 442 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 SNORD113-6-201ENST00000363345 75 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU6-757P-201ENST00000410334 100 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC127526.1-201ENST00000417526 366 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC006960.1-201ENST00000419980 153 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 TMEM167AP1-201ENST00000423409 219 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC079780.1-201ENST00000428259 207 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 MTND1P32-201ENST00000433043 938 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 DNAJC19P1-201ENST00000455312 319 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AP001486.1-201ENST00000463339 476 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC023598.1-201ENST00000472521 361 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC025518.1-201ENST00000479856 347 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 RPL7P23-201ENST00000493874 747 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC022483.1-201ENST00000514020 567 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC090136.1-201ENST00000520009 240 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC008011.1-201ENST00000545989 227 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 DUXAP1-201ENST00000556632 463 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 CYCSP2-201ENST00000558168 301 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC055876.1-202ENST00000567053 138 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 COX6CP3-201ENST00000580869 223 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 VN1R82P-201ENST00000601481 356 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC013444.2-201ENST00000603317 787 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC011451.2-201ENST00000604303 598 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 AC244205.2-202ENST00000635781 342 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 MIR4275-201ENST00000636486 87 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 ZNF826P-207ENST00000622273 1910 ntBASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
PCDHGA1Q9Y5H4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 Y_RNA.500-201ENST00000384466 111 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 SNORA1.3-201ENST00000384676 136 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 HMGN2P8-201ENST00000391458 268 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 UBA52P6-201ENST00000399822 382 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU2-43P-201ENST00000410306 190 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 TPMTP2-201ENST00000414372 726 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 HIGD1AP15-201ENST00000416198 280 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 MTCYBP38-201ENST00000417160 1123 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 HMGB3P20-201ENST00000417997 600 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC006028.1-201ENST00000438379 402 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU7-136P-201ENST00000458819 69 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL359273.1-201ENST00000510918 627 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 RNU6-711P-201ENST00000517255 106 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC093331.1-201ENST00000521474 169 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL845331.3-202ENST00000562856 261 ntBASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.41□□□□□ -1.86
PCDHGA1Q9Y5H4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms