Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 MTCO1P42-201ENST00000457379 726 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 RPL7L1P8-201ENST00000469911 741 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 RPL7P19-201ENST00000469948 618 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 OR5H5P-201ENST00000503164 928 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC138853.1-201ENST00000503549 823 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC109464.2-201ENST00000510242 943 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 MTCO1P35-201ENST00000515270 228 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC093853.1-201ENST00000515689 483 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC022861.1-201ENST00000522981 663 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC112191.3-201ENST00000604371 277 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 AC131902.3-201ENST00000611767 581 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 MIR492-201ENST00000638676 116 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 OR52H1-202ENST00000641796 1061 ntBASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MRPS28Q9Y2Q9 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 OTUD4P1-201ENST00000237841 3067 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC097714.1-201ENST00000511272 1647 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 SNORA7.2-201ENST00000364446 145 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 RNU6-744P-201ENST00000365557 107 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 RNU6-1316P-201ENST00000384242 108 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 SNORA40.3-201ENST00000390964 122 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 U3.29-201ENST00000391296 212 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 Y_RNA.598-201ENST00000410480 95 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC012065.2-201ENST00000421295 375 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 OR8F1P-201ENST00000425243 930 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 RPS27AP12-201ENST00000429552 465 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC091390.1-201ENST00000433904 331 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 SNORA71B-202ENST00000439232 272 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC127537.2-201ENST00000439258 465 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC244505.5-201ENST00000443639 207 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 USP9YP12-201ENST00000450481 570 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC093392.2-201ENST00000450682 337 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AL590365.1-201ENST00000450788 243 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 RPS7P7-201ENST00000463499 571 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 PLGLA-201ENST00000465668 449 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC007537.2-201ENST00000472093 511 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC023424.2-201ENST00000493479 777 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 RPL7P47-201ENST00000497299 556 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC107401.1-201ENST00000503426 685 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 MTCO3P44-201ENST00000510977 541 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC091133.4-201ENST00000511142 308 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AF131216.2-201ENST00000512316 564 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC108064.1-201ENST00000513791 460 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC008489.1-201ENST00000524271 483 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC016957.1-201ENST00000534895 309 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 ZNF519P3-201ENST00000557158 1032 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 MIR3913-1-201ENST00000577744 102 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC009977.1-201ENST00000586015 570 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AC022916.3-201ENST00000592961 742 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 YWHAQP7-201ENST00000603536 658 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 SEPT7P9-203ENST00000604116 343 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 HMGN2P28-201ENST00000606102 262 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AL391261.4-201ENST00000616012 481 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 AL049780.3-201ENST00000624612 1583 ntBASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MRPS28Q9Y2Q9 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MRPS28Q9Y2Q9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 148 ms