Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 EIF2AP4-201ENST00000424793 1781 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 RNU1-59P-201ENST00000364829 162 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 GNG5P2-201ENST00000372054 207 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 RNA5SP56-201ENST00000410277 118 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 RNU6-101P-201ENST00000410323 104 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 MRPL48P1-201ENST00000445390 636 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 TPT1P13-201ENST00000449760 499 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 RPL37P6-202ENST00000464216 403 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 RNU6-307P-201ENST00000516743 106 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 AP003385.6-201ENST00000531603 374 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 AC104763.2-201ENST00000604179 382 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 AC007619.2-201ENST00000605743 379 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 MPP6-209ENST00000625307 126 ntTSL 5 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
NOD1Q9Y239 AC107027.3-201ENST00000565095 3473 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.83□□□□□ -1.48
NOD1Q9Y239 MAPK10-263ENST00000641052 4307 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 AL451142.2-201ENST00000429076 2090 ntBASIC5.83□□□□□ -1.48
NOD1Q9Y239 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC091812.1-201ENST00000432235 1948 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 RNU6-379P-201ENST00000363813 104 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 SNORA23-201ENST00000365128 182 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC110754.1-201ENST00000399740 601 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 AL078599.1-201ENST00000402075 293 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 MIR1250-201ENST00000408098 113 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 RNU6-293P-201ENST00000411259 106 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC016397.1-201ENST00000412463 242 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 DDX39BP1-205ENST00000422507 192 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 ELOCP18-201ENST00000434209 337 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 RPL12P46-201ENST00000436610 195 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 RPS29P10-201ENST00000439197 166 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC026979.1-201ENST00000492525 396 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 CEACAMP10-202ENST00000495431 496 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC104136.1-201ENST00000512969 394 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 RNU6-352P-201ENST00000516908 107 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 RNU6-677P-201ENST00000516914 101 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 MIR4512-201ENST00000583257 77 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 RN7SL52P-201ENST00000584271 284 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 RN7SL722P-201ENST00000617780 284 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 RN7SL565P-201ENST00000618246 284 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 SNX18P3-202ENST00000565670 1750 ntBASIC5.82□□□□□ -1.48
NOD1Q9Y239 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.82□□□□□ -1.48
NOD1Q9Y239 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
NOD1Q9Y239 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
NOD1Q9Y239 AC015799.1-201ENST00000622996 3122 ntBASIC5.81□□□□□ -1.48
NOD1Q9Y239 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.81□□□□□ -1.48
NOD1Q9Y239 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
NOD1Q9Y239 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.81□□□□□ -1.48
NOD1Q9Y239 RNU6-263P-201ENST00000363811 107 ntBASIC5.81□□□□□ -1.48
NOD1Q9Y239 RNU6-450P-201ENST00000364654 107 ntBASIC5.81□□□□□ -1.48
NOD1Q9Y239 MIR135A2-201ENST00000384854 100 ntBASIC5.81□□□□□ -1.48
NOD1Q9Y239 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.81□□□□□ -1.48
NOD1Q9Y239 AL137014.1-201ENST00000420490 1226 ntBASIC5.81□□□□□ -1.48
NOD1Q9Y239 AC243428.1-201ENST00000421099 264 ntBASIC5.81□□□□□ -1.48
NOD1Q9Y239 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.81□□□□□ -1.48
NOD1Q9Y239 EIF4EP1-201ENST00000422311 642 ntBASIC5.81□□□□□ -1.48
NOD1Q9Y239 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms