Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 SNORA33.2-201ENST00000365413 134 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-398P-201ENST00000384143 109 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 Y_RNA.493-201ENST00000384422 102 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-1060P-201ENST00000384664 107 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-550P-201ENST00000391057 101 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 MIR548F5-201ENST00000408421 86 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 MIR1271-201ENST00000408537 86 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 POLHP1-201ENST00000411806 470 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RPL21P24-201ENST00000413752 448 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RPL17P36-201ENST00000420302 549 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC005517.2-201ENST00000424673 553 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RPL7AP49-201ENST00000429522 581 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC068287.1-201ENST00000430283 295 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL591438.1-201ENST00000433508 581 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RPL21P112-201ENST00000434403 463 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL162389.1-201ENST00000449233 177 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC107399.1-201ENST00000451226 265 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC091153.1-201ENST00000466297 402 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SL817P-201ENST00000480777 288 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SL432P-201ENST00000484057 298 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL163540.1-201ENST00000485382 386 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC108078.2-201ENST00000510750 236 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC103783.1-201ENST00000520506 373 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AP003385.6-201ENST00000531603 374 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 APOOP3-201ENST00000536787 586 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 PARP1P2-201ENST00000556806 195 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC040958.1-201ENST00000561102 201 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SL356P-201ENST00000582228 248 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 MIR3672-201ENST00000584290 82 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC008521.1-201ENST00000587471 187 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.6-201ENST00000603753 252 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.11-201ENST00000604059 253 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 CYP2C61P-201ENST00000604072 290 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL031320.1-201ENST00000604177 357 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.10-201ENST00000604330 253 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC008162.1-201ENST00000604718 254 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.1-201ENST00000604752 252 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.5-201ENST00000605253 252 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.12-201ENST00000605291 253 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.8-201ENST00000605353 252 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC080078.3-201ENST00000605407 463 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.9-201ENST00000605428 253 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL670379.7-201ENST00000605823 252 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC103705.1-201ENST00000619013 241 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AL450326.2-201ENST00000421913 1962 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 AC092747.4-201ENST00000620519 1861 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CDC42EP3Q9UKI2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AP000542.2-201ENST00000623199 6179 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 SCN1A-220ENST00000641603 12506 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RPL32P3-201ENST00000359025 275 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RNU6-254P-201ENST00000363377 107 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RNA5SP455-201ENST00000365190 119 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 UBBP2-201ENST00000376781 231 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 EIF4E2P1-201ENST00000393781 255 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 MIR1250-201ENST00000408098 113 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 UBE2FP1-201ENST00000416536 447 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RAC1P6-201ENST00000423911 575 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 CALM2P2-201ENST00000428512 440 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 PSMA2P3-201ENST00000429685 675 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC079168.1-201ENST00000458741 345 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC004801.2-202ENST00000463559 283 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC022795.1-201ENST00000473808 480 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RPL7P43-201ENST00000478876 753 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RN7SL244P-201ENST00000493405 297 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC140172.1-201ENST00000502928 141 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC091912.1-201ENST00000511351 248 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 RNA5SP454-201ENST00000517231 127 ntBASIC4.29□□□□□ -1.72
CDC42EP3Q9UKI2 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms