Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC116667.1-201ENST00000604855 2072 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC139713.2-214ENST00000642059 1811 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RPL7P26-201ENST00000333817 754 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RNU1-108P-201ENST00000362556 161 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 Y_RNA.61-201ENST00000362835 102 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RNU6-179P-201ENST00000363350 107 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RNU6-1155P-201ENST00000363554 107 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RNU5E-6P-201ENST00000365574 115 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RNU6-767P-201ENST00000384132 107 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 HSPD1P16-201ENST00000402302 394 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AL136116.1-201ENST00000403591 381 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 LAP3P1-201ENST00000403648 294 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AL356967.1-201ENST00000406305 431 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RN7SKP267-201ENST00000410381 285 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RPEP3-201ENST00000425462 676 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 MTND1P18-201ENST00000448191 573 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 TPT1P12-201ENST00000448968 492 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC079168.2-201ENST00000453977 416 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 MTCO2P30-201ENST00000503662 364 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AF186190.1-201ENST00000517470 480 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC126177.3-201ENST00000551839 688 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC068831.4-201ENST00000556118 109 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AL034351.1-201ENST00000605288 668 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RNA5SP108-201ENST00000605921 117 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 TUG1_2.1-201ENST00000614234 87 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 SNHG22-203ENST00000617833 660 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 uc_338.11-201ENST00000619132 160 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.33□□□□□ -1.56
DDX41Q9UJV9 ZFRP1-201ENST00000457579 2970 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 AC108467.2-201ENST00000617640 1597 ntBASIC5.33□□□□□ -1.56
DDX41Q9UJV9 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 SNORA62.1-201ENST00000364287 154 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 Y_RNA.263-201ENST00000364659 114 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 RNU2-36P-201ENST00000410361 191 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 ELOCP19-201ENST00000411919 318 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC073415.1-201ENST00000449240 153 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 RN7SL385P-201ENST00000468873 276 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 RPL39P36-201ENST00000490784 156 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC009643.1-201ENST00000532030 391 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC010525.2-201ENST00000590920 195 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 C8orf59P2-201ENST00000603441 271 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 LINC00901.1-201ENST00000617252 152 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC243312.2-201ENST00000623340 601 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 AC022140.2-201ENST00000623500 188 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.32□□□□□ -1.56
DDX41Q9UJV9 SCN1A-220ENST00000641603 12506 ntBASIC5.32□□□□□ -1.56
DDX41Q9UJV9 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 EXOC5P1-201ENST00000510543 1969 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 Z73965.1-201ENST00000623412 2297 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 OR4G1P-203ENST00000641984 1631 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC068538.1-201ENST00000376856 336 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 MIR135A2-201ENST00000384854 100 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 EEF1A1P40-201ENST00000412883 573 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 RPS7P15-201ENST00000415804 584 ntBASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.31□□□□□ -1.56
DDX41Q9UJV9 AC099677.1-201ENST00000420575 175 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms