Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC104576.1-201ENST00000524225 88 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AP000827.1-201ENST00000527814 258 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC005951.2-201ENST00000576282 495 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 FKBP1AP1-201ENST00000594588 318 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AL162431.4-201ENST00000604674 411 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AL160281.1-201ENST00000605307 311 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC020634.1-201ENST00000608701 549 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 U2.1-201ENST00000618978 145 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 MIR6837-201ENST00000620884 64 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AL359955.1-201ENST00000455242 3275 ntBASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FOXD3Q9UJU5 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
FOXD3Q9UJU5 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.09□□□□□ -1.6
FOXD3Q9UJU5 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
FOXD3Q9UJU5 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.09□□□□□ -1.6
FOXD3Q9UJU5 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
FOXD3Q9UJU5 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.6
FOXD3Q9UJU5 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.09□□□□□ -1.6
FOXD3Q9UJU5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AL159987.1-201ENST00000347911 293 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 RNU6-379P-201ENST00000363813 104 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 RNU6-450P-201ENST00000364654 107 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 Y_RNA.489-201ENST00000384410 101 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC063979.1-201ENST00000415539 377 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 UBE2D3P2-201ENST00000424409 445 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC093414.1-201ENST00000434712 514 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 RPL26P6-201ENST00000440913 438 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AL353752.1-201ENST00000454946 260 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC087588.1-201ENST00000462203 316 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AP000942.1-201ENST00000463969 747 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 FTH1P2-201ENST00000466086 412 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 SNORA40.14-201ENST00000516543 86 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 RNU4-60P-201ENST00000517239 135 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC021678.3-201ENST00000517893 476 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AP005902.1-201ENST00000521358 186 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC136777.2-201ENST00000522979 358 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC008814.1-201ENST00000603797 406 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AL161616.1-201ENST00000611867 286 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC090607.5-201ENST00000615692 224 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC068870.1-201ENST00000563737 2455 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AC009812.4-201ENST00000569134 1805 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 AL391684.1-202ENST00000641293 1636 ntBASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
FOXD3Q9UJU5 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 U3.10-201ENST00000364459 214 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 Y_RNA.314-201ENST00000365114 102 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 RNU6-26P-201ENST00000383985 107 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 RNU1-136P-201ENST00000384181 164 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 AL445529.1-201ENST00000398713 389 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 AL109941.1-201ENST00000401925 229 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 MIR1286-201ENST00000408112 78 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 MIR1252-201ENST00000408861 65 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 AL030996.1-201ENST00000411430 235 ntBASIC5.07□□□□□ -1.6
FOXD3Q9UJU5 AL513331.1-201ENST00000411908 397 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms