Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AL606923.1-201ENST00000406616 190 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 MTND3P8-201ENST00000412909 339 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 RPL23AP38-201ENST00000423801 469 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 RPS27AP12-201ENST00000429552 465 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 ELOCP18-201ENST00000434209 337 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AL359265.2-201ENST00000434367 631 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AC073264.2-201ENST00000448886 166 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 TPT1P13-201ENST00000449760 499 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AC005008.1-201ENST00000456151 612 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AC007547.1-201ENST00000462177 490 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 RN7SL738P-201ENST00000470264 297 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 NIP7P2-201ENST00000485801 544 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 RPS15AP36-201ENST00000492022 382 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AC025164.1-201ENST00000496249 478 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 RN7SKP46-201ENST00000515942 234 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 RNA5SP503-201ENST00000517047 117 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 HMGN1P28-201ENST00000521340 364 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AP005435.4-201ENST00000529514 284 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 MIR4330-201ENST00000579077 105 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 MIR4742-201ENST00000581069 85 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 MIR4293-201ENST00000584305 78 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 uc_338.18-201ENST00000615451 175 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 A2MP1-204ENST00000566278 4130 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 ZNF33CP-201ENST00000432492 2030 ntBASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
KCMF1Q9P0J7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AC073343.1-201ENST00000328239 651 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL590240.1-201ENST00000334118 313 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RNU1-94P-201ENST00000362627 173 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RNU6-179P-201ENST00000363350 107 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 SNORA51.2-201ENST00000364595 132 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RNU5E-6P-201ENST00000365574 115 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 MIR514A2-201ENST00000385131 88 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 MIR514A3-201ENST00000385132 88 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL080315.1-201ENST00000406055 466 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 TXNP7-201ENST00000406296 293 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RPS16P5-201ENST00000406501 404 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RNU4-26P-201ENST00000410270 107 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RN7SKP267-201ENST00000410381 285 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 Y_RNA.625-201ENST00000411256 107 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL590139.1-201ENST00000416267 400 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 UBE2FP1-201ENST00000416536 447 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL590639.1-201ENST00000456484 337 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RPS29P33-201ENST00000456717 146 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL162395.1-201ENST00000457882 422 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AP006289.1-201ENST00000538089 277 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 PSMA3P-201ENST00000555485 635 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AC093838.1-201ENST00000613014 469 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL603758.1-201ENST00000618654 241 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AL136164.3-201ENST00000624429 3978 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 U6.114-201ENST00000636407 96 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 AC068254.2-201ENST00000623938 3577 ntBASIC4.42□□□□□ -1.7
KCMF1Q9P0J7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
KCMF1Q9P0J7 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms