Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NCKIPSDQ9NZQ3 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 RNA5SP171-201ENST00000391071 115 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AIMP1P1-201ENST00000418670 937 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC007742.1-201ENST00000425789 329 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 ELOCP26-201ENST00000436067 329 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 RSU1P2-202ENST00000437884 485 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AL358232.1-201ENST00000448030 501 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC093392.2-201ENST00000450682 337 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 BTF3P5-201ENST00000457252 467 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 snoU13.3-201ENST00000459441 104 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 SNORD42A-201ENST00000459584 64 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 KLF3P2-201ENST00000465138 268 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC104563.1-201ENST00000476147 376 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 S100A11P1-201ENST00000477525 312 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC109464.2-201ENST00000510242 943 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AP004247.1-201ENST00000531556 1289 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AP002453.2-201ENST00000533503 320 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC135001.1-201ENST00000544546 283 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC136619.2-201ENST00000563361 631 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC090615.1-201ENST00000577519 154 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR4307-201ENST00000582802 84 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AL139089.1-201ENST00000620372 975 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 CR392039.5-201ENST00000623201 510 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC093591.3-201ENST00000634516 308 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC099654.12-201ENST00000639868 649 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 AC006378.2-201ENST00000623178 2476 ntBASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-1249P-201ENST00000363237 111 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 RNA5SP97-201ENST00000365006 84 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 RNU6-213P-201ENST00000384051 104 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 SNORD51-201ENST00000384320 80 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 MIR23A-201ENST00000385245 73 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 MTND1P23-201ENST00000416931 372 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 MRPS18BP2-201ENST00000434310 759 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 RPL37P21-201ENST00000435890 276 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 MTATP6P23-201ENST00000440153 476 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AL353572.1-201ENST00000442490 417 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AL500522.2-201ENST00000448562 343 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 snoU13.8-201ENST00000458890 104 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 HMGB1P36-201ENST00000487709 576 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC106872.3-201ENST00000495104 446 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC021678.1-201ENST00000505195 936 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 COX7A2P2-201ENST00000505291 250 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AF131216.2-201ENST00000512316 564 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 NARSP2-201ENST00000518524 679 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC068587.4-201ENST00000533893 186 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC090616.5-202ENST00000582111 297 ntBASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
NCKIPSDQ9NZQ3 AC090337.1-201ENST00000579651 2074 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms