Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 SNRPGP6-201ENST00000451124 220 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC2.56□□□□□ -2
CLN6Q9NWW5 OFD1P3Y-201ENST00000453312 783 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 SUMO2P2-201ENST00000456482 255 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL21P39-201ENST00000463605 483 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AL049714.1-201ENST00000466686 347 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL27AP5-201ENST00000469428 449 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC003982.1-202ENST00000469928 248 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC011979.1-201ENST00000472300 483 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL21P93-201ENST00000480465 489 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC233702.1-201ENST00000482905 502 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC087190.1-201ENST00000484462 480 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLN6Q9NWW5 AC093591.1-201ENST00000491435 481 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL21P129-201ENST00000491732 478 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.56□□□□□ -2
CLN6Q9NWW5 RPL21P16-201ENST00000495531 483 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 NAMPTP2-201ENST00000505629 1115 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLN6Q9NWW5 AL359273.1-201ENST00000510918 627 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 RNU6-1261P-201ENST00000517194 104 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.56□□□□□ -2
CLN6Q9NWW5 OR4R2P-201ENST00000530815 597 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.56□□□□□ -2
CLN6Q9NWW5 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.56□□□□□ -2
CLN6Q9NWW5 AC004486.1-201ENST00000546846 233 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC125611.1-201ENST00000549563 229 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 SETP2-201ENST00000553886 926 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.56□□□□□ -2
CLN6Q9NWW5 MIR5708-201ENST00000579723 85 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLN6Q9NWW5 MIR3670-2-201ENST00000582974 65 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 MIR3670-1-201ENST00000584160 65 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 MIR3670-3-201ENST00000584855 65 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 ZNF861P-201ENST00000588126 639 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.56□□□□□ -2
CLN6Q9NWW5 AC099785.1-201ENST00000605697 437 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AL158211.2-201ENST00000607282 395 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AP000254.1-201ENST00000609934 520 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.56□□□□□ -2
CLN6Q9NWW5 DUXAP10-204ENST00000612052 616 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 MIR3670-4-201ENST00000612260 65 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 MIR7112-201ENST00000616126 65 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 AC010872.1-201ENST00000624225 675 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 CRYM-AS1-204ENST00000637983 556 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 MKKS-204ENST00000639674 192 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
CLN6Q9NWW5 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
CLN6Q9NWW5 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.56□□□□□ -2
CLN6Q9NWW5 AC008568.2-201ENST00000623862 2313 ntBASIC2.56□□□□□ -2
CLN6Q9NWW5 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CLN6Q9NWW5 DEFB108F-201ENST00000344638 222 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 RNU6-236P-201ENST00000363886 106 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 RNA5SP139-201ENST00000364340 117 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 SNORA71.1-201ENST00000364523 117 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
CLN6Q9NWW5 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.55□□□□□ -2
CLN6Q9NWW5 SNORD21-201ENST00000383953 95 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.55□□□□□ -2
CLN6Q9NWW5 SNORD65.1-201ENST00000390889 71 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CLN6Q9NWW5 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
CLN6Q9NWW5 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLN6Q9NWW5 AL645937.1-202ENST00000421799 937 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AL513175.2-201ENST00000422071 443 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC2.55□□□□□ -2
CLN6Q9NWW5 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.55□□□□□ -2
CLN6Q9NWW5 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.55□□□□□ -2
CLN6Q9NWW5 MTND2P5-201ENST00000432656 1006 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 AL513043.1-201ENST00000439124 535 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC092427.1-201ENST00000439177 601 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 UBBP3-201ENST00000445497 241 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AP000705.1-201ENST00000454567 350 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC026410.2-201ENST00000460281 156 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 RPS15AP17-201ENST00000470598 390 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 RPL31P60-201ENST00000478450 367 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC023424.2-201ENST00000493479 777 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.55□□□□□ -2
CLN6Q9NWW5 HSPD1P15-201ENST00000505573 1122 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.55□□□□□ -2
CLN6Q9NWW5 SAP18P1-201ENST00000512058 390 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 TBCAP3-201ENST00000512475 312 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.55□□□□□ -2
CLN6Q9NWW5 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.55□□□□□ -2
CLN6Q9NWW5 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 DUXAP2-201ENST00000519198 589 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.55□□□□□ -2
CLN6Q9NWW5 DEFB108D-201ENST00000527787 222 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 OR7K1P-201ENST00000546439 926 ntBASIC2.55□□□□□ -2
CLN6Q9NWW5 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.55□□□□□ -2
CLN6Q9NWW5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.55□□□□□ -2
CLN6Q9NWW5 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.55□□□□□ -2
CLN6Q9NWW5 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.55□□□□□ -2
CLN6Q9NWW5 OR4K8P-201ENST00000578842 1048 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms