Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AL136126.1-201ENST00000473603 402 ntBASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC055855.1-201ENST00000489563 579 ntBASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 TRMT10BP1-201ENST00000519377 943 ntBASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC068790.3-201ENST00000602988 553 ntBASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC024220.1-201ENST00000603675 484 ntBASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC004853.1-201ENST00000604902 698 ntBASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 AC090971.5-201ENST00000621102 293 ntBASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
PDLIM7Q9NR12 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 ASNSP3-201ENST00000451989 1306 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 ZNF33CP-201ENST00000432492 2030 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 Y_RNA.387-201ENST00000383918 102 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 RNU6-738P-201ENST00000384531 106 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 RNU6-606P-201ENST00000384721 111 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 MIR921-201ENST00000401133 56 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 RN7SKP235-201ENST00000410662 305 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 RPL36AP10-201ENST00000421785 322 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 COX6CP15-201ENST00000426313 211 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC137499.1-201ENST00000427602 88 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC073415.1-201ENST00000449240 153 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 PPP1R2P5-201ENST00000457256 603 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 SNORD19B-201ENST00000459623 84 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 PLGLA-201ENST00000465668 449 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC053481.1-201ENST00000467217 306 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 TRAV8-5-201ENST00000537369 341 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 BNIP3P6-201ENST00000549284 499 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AL161713.1-201ENST00000555538 145 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC026464.5-201ENST00000562497 722 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 MIR3171-201ENST00000584270 74 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 UBE2L4-201ENST00000587688 464 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 MIR6075-201ENST00000620782 95 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC138965.3-201ENST00000623875 498 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 AC134503.1-201ENST00000633048 54 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 LARP1BP1-201ENST00000506036 1359 ntBASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
PDLIM7Q9NR12 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC130650.2-201ENST00000618736 2403 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 RNA5SP387-201ENST00000364226 106 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM7Q9NR12 SNORD37.1-201ENST00000390968 65 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC069218.2-201ENST00000411665 344 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 RPS15AP40-201ENST00000419621 391 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 RPL21P91-201ENST00000429231 479 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 GPM6BP2-201ENST00000432046 144 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 AL356276.2-201ENST00000435919 558 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM7Q9NR12 GPM6BP1-201ENST00000446387 144 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC104073.1-201ENST00000451988 151 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 MTND3P16-201ENST00000452205 344 ntBASIC5□□□□□ -1.61
PDLIM7Q9NR12 AC007547.1-201ENST00000462177 490 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms