Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.97□□□□□ -1.77
DDX4Q9NQI0 MIR4727-201ENST00000622232 55 ntBASIC3.97□□□□□ -1.77
DDX4Q9NQI0 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
DDX4Q9NQI0 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DDX4Q9NQI0 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
DDX4Q9NQI0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
DDX4Q9NQI0 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
DDX4Q9NQI0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.97□□□□□ -1.77
DDX4Q9NQI0 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 ZNF734P-201ENST00000419494 1534 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 CR383658.2-201ENST00000547576 1525 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 RNU1-70P-201ENST00000362618 164 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 MT-TH-201ENST00000387441 69 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 FNDC3CP-201ENST00000420795 1155 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 RPL21P112-201ENST00000434403 463 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 ATP5C1P1-201ENST00000441945 895 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AL357552.1-201ENST00000445254 415 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 ARPC3P2-201ENST00000457786 533 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 PABPC1P3-201ENST00000469174 459 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC087312.1-201ENST00000471411 480 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC078918.1-201ENST00000498515 228 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC093809.1-201ENST00000509155 340 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 PCMTD1P2-201ENST00000565017 355 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 MIR4325-201ENST00000583049 90 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC010928.3-201ENST00000587712 541 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 AC245008.1-201ENST00000608123 476 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.96□□□□□ -1.78
DDX4Q9NQI0 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
DDX4Q9NQI0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AL157700.1-201ENST00000561973 1432 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AL353743.1-202ENST00000431724 1695 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 RNU1-89P-201ENST00000384592 164 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 RPL7P30-201ENST00000420888 709 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AL831737.1-201ENST00000441288 271 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 EEF1E1P1-201ENST00000446998 430 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 PAXBP1P1-201ENST00000449315 447 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC006445.1-201ENST00000491925 405 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC117532.1-201ENST00000514638 323 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 MTND5P4-201ENST00000514978 288 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC011260.1-201ENST00000578420 472 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 OR4G1P-201ENST00000588632 938 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 YWHAQP7-201ENST00000603536 658 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC110741.2-201ENST00000605278 268 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AC073114.1-201ENST00000612027 490 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AL357080.1-201ENST00000617394 239 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AL356596.1-201ENST00000624230 379 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 AL513302.2-201ENST00000562313 1842 ntBASIC3.95□□□□□ -1.78
DDX4Q9NQI0 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
DDX4Q9NQI0 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 GNG5P1-201ENST00000255500 204 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
DDX4Q9NQI0 AL672167.1-206ENST00000356293 943 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 RNU6-433P-201ENST00000363216 104 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 Y_RNA.201-201ENST00000364052 96 ntBASIC3.94□□□□□ -1.78
DDX4Q9NQI0 RNU6-660P-201ENST00000364566 109 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms