Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 SNORD113-7-201ENST00000363762 77 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 RNU6-82P-201ENST00000363970 107 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 RNU6-188P-201ENST00000364207 107 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 RNU6-1078P-201ENST00000364522 103 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 SNORA24.1-201ENST00000384401 135 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 MIR921-201ENST00000401133 56 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 RNU6-370P-201ENST00000411008 104 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 RPS15AP40-201ENST00000419621 391 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 CFL1P1-202ENST00000432948 411 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 RPL35AP28-201ENST00000459730 331 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AC097484.1-201ENST00000471148 389 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 RPL7P43-201ENST00000478876 753 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 RPS4XP1-201ENST00000482189 787 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AC025164.1-201ENST00000496249 478 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AC090136.1-201ENST00000520009 240 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 SNRPGP18-201ENST00000553000 214 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AL049779.2-201ENST00000553847 315 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.34□□□□□ -1.55
CBX8Q9HC52 FKBP1AP1-201ENST00000594588 318 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AL451044.1-201ENST00000604867 238 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 AL353662.3-201ENST00000625131 237 ntBASIC5.34□□□□□ -1.55
CBX8Q9HC52 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CBX8Q9HC52 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CBX8Q9HC52 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.34□□□□□ -1.56
CBX8Q9HC52 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.34□□□□□ -1.56
CBX8Q9HC52 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC5.34□□□□□ -1.56
CBX8Q9HC52 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 ZNF734P-201ENST00000419494 1534 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 MTND5P1-201ENST00000445440 1375 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 MIR585-201ENST00000384887 94 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 HDGFP1-201ENST00000405943 252 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 RNA5SP107-201ENST00000411358 122 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 RPL37P10-201ENST00000412884 288 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AL591848.1-201ENST00000413092 322 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 DDX39BP1-205ENST00000422507 192 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AL358176.2-201ENST00000425769 204 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 RPS17P8-201ENST00000434525 335 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 AL137792.2-201ENST00000443484 235 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 RPL36AP13-201ENST00000457490 317 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 SRP72-202ENST00000504757 745 ntTSL 2 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 RN7SKP260-201ENST00000516907 149 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 RNU6-273P-201ENST00000516937 96 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.33□□□□□ -1.56
CBX8Q9HC52 SETP7-201ENST00000552169 453 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 XIAPP1-201ENST00000603162 600 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AC007566.2-201ENST00000603642 413 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AC012443.1-201ENST00000605605 231 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 AC138305.3-201ENST00000624988 240 ntBASIC5.33□□□□□ -1.56
CBX8Q9HC52 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX8Q9HC52 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CBX8Q9HC52 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CBX8Q9HC52 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CBX8Q9HC52 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CBX8Q9HC52 AP000542.2-201ENST00000623199 6179 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 AC139713.2-215ENST00000641428 5037 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.32□□□□□ -1.56
CBX8Q9HC52 RNU6-960P-201ENST00000364056 120 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 Y_RNA.212-201ENST00000364177 102 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 RNU6-1105P-201ENST00000384774 107 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 Y_RNA.576-201ENST00000384781 102 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 AL391361.1-201ENST00000405580 489 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 AC113618.1-201ENST00000416747 285 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC5.32□□□□□ -1.56
CBX8Q9HC52 AL645608.4-201ENST00000423619 154 ntBASIC5.32□□□□□ -1.56
CBX8Q9HC52 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.32□□□□□ -1.56
CBX8Q9HC52 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms