Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC055876.1-202ENST00000567053 138 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 COX6CP3-201ENST00000580869 223 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 AC022146.1-201ENST00000595307 847 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.71□□□□□ -1.82
BRF2Q9HAW0 AL137849.1-201ENST00000604767 169 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 AC004067.1-201ENST00000608733 700 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 AL603758.1-201ENST00000618654 241 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BRF2Q9HAW0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
BRF2Q9HAW0 AC010149.2-201ENST00000637608 315 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.71□□□□□ -1.82
BRF2Q9HAW0 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
BRF2Q9HAW0 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC118273.1-201ENST00000525324 3006 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC126755.2-208ENST00000327792 462 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC138969.1-213ENST00000331436 462 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 Y_RNA.46-201ENST00000362695 102 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AP000567.1-201ENST00000406413 156 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 CCNG1P1-201ENST00000406783 885 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 PPP1R11P2-201ENST00000423543 382 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 SNORA71B-202ENST00000439232 272 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AL360221.1-201ENST00000445989 335 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 TPT1P14-201ENST00000448018 505 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RNA5SP269-201ENST00000459032 137 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 MTND4LP3-201ENST00000468320 276 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RPS23P3-201ENST00000470993 430 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC084198.1-201ENST00000477747 402 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 PPIAP15-201ENST00000479662 484 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RPS3AP50-201ENST00000487064 803 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC114967.1-201ENST00000504890 259 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 FABP5P5-201ENST00000515537 406 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RNA5SP164-201ENST00000516533 110 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RNA5SP143-201ENST00000516936 115 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AP002453.2-201ENST00000533503 320 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AP000873.5-201ENST00000533906 236 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AL133271.1-201ENST00000538229 291 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC105224.1-201ENST00000587055 421 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 BNIP3P8-201ENST00000597863 560 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC244505.7-201ENST00000599675 272 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RN7SKP299-201ENST00000606679 301 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC025594.3-201ENST00000613068 790 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 AC138915.3-201ENST00000562908 1389 ntBASIC3.7□□□□□ -1.82
BRF2Q9HAW0 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
BRF2Q9HAW0 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AP001148.1-201ENST00000624124 2359 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 FGF7P2-201ENST00000332473 296 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RNU5A-1-201ENST00000362698 116 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RNU4-91P-201ENST00000364778 135 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AL138878.1-201ENST00000405131 347 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 FCF1P10-201ENST00000407590 479 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RNA5SP317-201ENST00000410176 116 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RNA5SP311-201ENST00000411290 116 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RABEPKP1-201ENST00000440529 1026 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC114755.5-201ENST00000447760 831 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RN7SL93P-201ENST00000463035 293 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC026979.1-201ENST00000492525 396 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 AC010424.1-201ENST00000506336 297 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RNA5SP315-201ENST00000516340 116 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RN7SKP209-201ENST00000516888 304 ntBASIC3.69□□□□□ -1.82
BRF2Q9HAW0 RNA5SP312-201ENST00000517068 116 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms