Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 RPL31P60-201ENST00000478450 367 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 ARL4AP2-201ENST00000507378 601 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC006445.2-201ENST00000510061 472 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 RNU6-1028P-201ENST00000517164 93 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC104986.1-201ENST00000517978 436 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 PSMA2P1-201ENST00000526365 646 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 MIR4637-201ENST00000582405 84 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC006116.7-201ENST00000590141 756 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 GLUD1P4-201ENST00000590914 418 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC006539.2-201ENST00000601729 572 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC079089.3-201ENST00000603094 673 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC096947.1-201ENST00000603233 470 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 NUTF2P8-201ENST00000604593 363 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 HSPE1P7-201ENST00000604681 321 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC080013.4-201ENST00000607624 649 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AC011330.2-201ENST00000621680 635 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 AL138960.2-201ENST00000625145 535 ntBASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
POLR1EQ9GZS1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC009812.4-201ENST00000569134 1805 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 SNRPEP3-201ENST00000338402 276 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 RNU6-216P-201ENST00000363282 104 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 SNORA71.1-201ENST00000364523 117 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 SNORA70.4-201ENST00000365509 134 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 SNORA54-201ENST00000384281 123 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 RNU6-1176P-201ENST00000390955 107 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 MIR1290-201ENST00000408735 78 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 RN7SKP220-201ENST00000410611 288 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 RNU2-42P-201ENST00000410697 113 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 RN7SKP123-201ENST00000410732 291 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 SNRPGP6-201ENST00000451124 220 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC113420.1-201ENST00000507903 571 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC093752.1-206ENST00000511823 336 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 RN7SKP57-201ENST00000517248 293 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 DEFB130C-202ENST00000530001 230 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AP002404.1-201ENST00000532005 451 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AP000867.2-201ENST00000532468 320 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 MIR3921-201ENST00000577308 85 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC078899.3-201ENST00000599065 212 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 BNIP3P11-201ENST00000603878 563 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC093673.2-201ENST00000609674 331 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AP000254.1-201ENST00000609934 520 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC084824.4-201ENST00000620106 731 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 MIR1322-201ENST00000638013 71 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC097714.1-201ENST00000511272 1647 ntBASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.07□□□□□ -1.92
POLR1EQ9GZS1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 RNU6-1000P-201ENST00000391066 106 ntBASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 RNU6-1197P-201ENST00000391183 107 ntBASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 AL355143.1-201ENST00000407101 841 ntBASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 ATG3P1-201ENST00000419507 911 ntBASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 AC104332.2-201ENST00000429959 156 ntBASIC3.06□□□□□ -1.92
POLR1EQ9GZS1 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms