Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 MIR432-201ENST00000606207 94 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC245517.5-201ENST00000611529 162 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 MIR6830-201ENST00000636015 70 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AC024614.3-201ENST00000637860 256 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AL138713.1-201ENST00000624026 2130 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 DHX40P1-201ENST00000588725 1412 ntBASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
AMBRA1Q9C0C7 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 OR52B1P-201ENST00000316506 909 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC126755.2-208ENST00000327792 462 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC138969.1-213ENST00000331436 462 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RNA5SP479-201ENST00000364858 117 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 SNORA69-201ENST00000383895 132 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 MIR19A-201ENST00000384878 82 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-1009P-201ENST00000390996 107 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 SDHCP2-201ENST00000398565 501 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RNU2-9P-201ENST00000410194 145 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RN7SKP263-201ENST00000411194 309 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RPS12P10-201ENST00000427031 377 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RPL23AP30-201ENST00000432419 501 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 FTH1P1-201ENST00000437933 532 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RPS15AP9-201ENST00000439856 381 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RPL23AP43-201ENST00000446445 471 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC114755.5-201ENST00000447760 831 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 SNRPGP6-201ENST00000451124 220 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 NANOGP10-201ENST00000453325 895 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC108059.3-201ENST00000456388 214 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-261P-201ENST00000459506 102 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AL049714.1-201ENST00000466686 347 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 HMGN1P12-201ENST00000499125 195 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC020893.1-201ENST00000502452 580 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-835P-201ENST00000516974 104 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 SETP7-201ENST00000552169 453 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 C8orf59P2-201ENST00000603441 271 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC007038.2-201ENST00000608095 740 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC006329.2-201ENST00000611491 394 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC068831.8-201ENST00000620171 435 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AC040168.1-201ENST00000623594 991 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 MTND4P29-201ENST00000503122 1372 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 AL592437.2-201ENST00000421655 2434 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 ZNF680P1-201ENST00000436625 1469 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 PABPC1P7-201ENST00000413177 1513 ntBASIC4.11□□□□□ -1.75
AMBRA1Q9C0C7 ZNF962P-201ENST00000443465 3140 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 Y_RNA.11-201ENST00000362375 109 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 RNA5SP388-201ENST00000362584 119 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 RNU5A-8P-201ENST00000364102 114 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 RNU6-761P-201ENST00000384148 107 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 MIR1-2-201ENST00000384961 85 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 MIR659-201ENST00000384963 97 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 SNORA57.1-201ENST00000391227 145 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 OR51A5P-201ENST00000415429 942 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 EIF1P3-201ENST00000423841 334 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 AC140076.1-201ENST00000449897 361 ntBASIC4.1□□□□□ -1.75
AMBRA1Q9C0C7 ABCF2P2-201ENST00000450549 296 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms