Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MTATP8P1-201ENST00000467115 207 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 RN7SL799P-201ENST00000475891 298 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC022133.1-201ENST00000490961 571 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 RPL23AP55-201ENST00000498163 452 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 RNA5SP34-201ENST00000516887 130 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 RANP3-201ENST00000530970 276 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC015720.2-201ENST00000567709 334 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC106782.4-201ENST00000568264 210 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC008814.1-201ENST00000603797 406 ntBASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.31□□□□□ -1.56
TRIM56Q9BRZ2 AC114947.2-201ENST00000565748 2125 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AL450326.2-201ENST00000421913 1962 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RNA5SP319-201ENST00000362768 119 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RNU6-188P-201ENST00000364207 107 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 Y_RNA.252-201ENST00000364556 101 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 SNORD3H-201ENST00000384486 214 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 SOD2P1-201ENST00000396543 562 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RN7SKP159-201ENST00000410657 292 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RPL21P24-201ENST00000413752 448 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 GJA6P-201ENST00000415117 1042 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 Z98949.2-201ENST00000440996 144 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RPL23AP33-201ENST00000442301 452 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 GAPDHP25-201ENST00000447061 1001 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RN7SL515P-201ENST00000463999 297 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AL133445.1-201ENST00000467051 452 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 RN7SL51P-201ENST00000468230 285 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 TRBV1-201ENST00000476502 284 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AC097473.1-201ENST00000508142 408 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AC108078.2-201ENST00000510750 236 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 AL138726.1-201ENST00000614873 333 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 PISRT1.1-201ENST00000616930 107 ntBASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TRIM56Q9BRZ2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC023421.1-201ENST00000590535 1785 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC063976.2-201ENST00000425667 3556 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 PNPT1P2-201ENST00000456768 2050 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RNU6-989P-201ENST00000362756 107 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 Y_RNA.476-201ENST00000384347 108 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 Y_RNA.493-201ENST00000384422 102 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RNU6-328P-201ENST00000390887 106 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RNA5SP219-201ENST00000390940 113 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 MIR450B-201ENST00000401182 78 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RPL21P67-201ENST00000402896 478 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RNU4-25P-201ENST00000410569 230 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RPL30P2-201ENST00000414021 291 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AL139095.3-201ENST00000419672 1203 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AL137014.1-201ENST00000420490 1226 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 SCARNA18-201ENST00000459004 134 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 U8.20-201ENST00000459445 131 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC116533.1-201ENST00000459748 321 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC100832.1-201ENST00000471945 383 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RN7SL184P-201ENST00000488308 297 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RN7SL547P-201ENST00000490793 290 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 RPS24P16-201ENST00000497294 392 ntBASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC5.29□□□□□ -1.56
TRIM56Q9BRZ2 BX510359.5-201ENST00000515651 304 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms