Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SYPL1P1-201ENST00000473622 768 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 AC022861.1-201ENST00000522981 663 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.45□□□□□ -1.86
CDCA3Q99618 HSPA8P13-201ENST00000523715 472 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.45□□□□□ -1.86
CDCA3Q99618 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.45□□□□□ -1.86
CDCA3Q99618 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.45□□□□□ -1.86
CDCA3Q99618 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.45□□□□□ -1.86
CDCA3Q99618 MIR4672-201ENST00000583126 81 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 AC022146.1-201ENST00000595307 847 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 AC021171.1-201ENST00000603137 706 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 AC080013.4-201ENST00000607624 649 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 AC004009.2-201ENST00000623016 728 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 AL137790.1-201ENST00000634283 177 ntBASIC3.45□□□□□ -1.86
CDCA3Q99618 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.45□□□□□ -1.86
CDCA3Q99618 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.45□□□□□ -1.86
CDCA3Q99618 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.44□□□□□ -1.86
CDCA3Q99618 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
CDCA3Q99618 HMGN2P8-201ENST00000391458 268 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AL590084.2-201ENST00000401481 382 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 HMGB1P17-201ENST00000403495 628 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 AL022400.1-201ENST00000423946 935 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AL593851.1-201ENST00000426171 157 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC006548.1-201ENST00000427470 102 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 BX890604.2-201ENST00000427883 474 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.44□□□□□ -1.86
CDCA3Q99618 RPL23AP69-201ENST00000431134 458 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.44□□□□□ -1.86
CDCA3Q99618 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC3.44□□□□□ -1.86
CDCA3Q99618 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.44□□□□□ -1.86
CDCA3Q99618 AC025750.2-201ENST00000442609 450 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 MTND5P2-201ENST00000442927 1142 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 ELOCP23-201ENST00000452014 332 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.44□□□□□ -1.86
CDCA3Q99618 MTCO3P11-201ENST00000455103 774 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 RPS20P32-201ENST00000456044 356 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 RPS27AP1-201ENST00000475545 471 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 RN7SL429P-201ENST00000479090 223 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC004924.1-201ENST00000480160 781 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 RN7SL489P-201ENST00000486185 223 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 LINC00888-204ENST00000487386 421 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 FAM172BP-201ENST00000487497 1089 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 RN7SL327P-201ENST00000488659 223 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC104685.1-201ENST00000502445 371 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.44□□□□□ -1.86
CDCA3Q99618 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.44□□□□□ -1.86
CDCA3Q99618 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.44□□□□□ -1.86
CDCA3Q99618 MTCYBP43-201ENST00000513621 740 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 RNU6-1129P-201ENST00000515964 104 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 RNU6-27P-201ENST00000516146 107 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.44□□□□□ -1.86
CDCA3Q99618 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.44□□□□□ -1.86
CDCA3Q99618 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.44□□□□□ -1.86
CDCA3Q99618 AC008751.2-201ENST00000597885 980 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC006254.3-201ENST00000603353 884 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC106791.2-201ENST00000604680 391 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 RN7SL853P-201ENST00000617250 223 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 SNORD39.4-201ENST00000620099 78 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AP003485.2-201ENST00000623636 610 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC091925.2-201ENST00000625059 256 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 CR381572.1-201ENST00000625098 102 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 AC019226.2-201ENST00000625973 424 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.44□□□□□ -1.86
CDCA3Q99618 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
CDCA3Q99618 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CDCA3Q99618 AL022578.1-201ENST00000439330 1433 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 OR4G11P-202ENST00000642116 1414 ntBASIC3.44□□□□□ -1.86
CDCA3Q99618 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.44□□□□□ -1.86
CDCA3Q99618 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDCA3Q99618 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDCA3Q99618 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CDCA3Q99618 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDCA3Q99618 RNA5SP235-201ENST00000365411 114 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
CDCA3Q99618 SNORA7.4-201ENST00000384249 137 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
CDCA3Q99618 RNU6-952P-201ENST00000391164 108 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 AL031679.1-201ENST00000400616 525 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 TPMTP2-201ENST00000414372 726 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.43□□□□□ -1.86
CDCA3Q99618 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.43□□□□□ -1.86
CDCA3Q99618 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC3.43□□□□□ -1.86
CDCA3Q99618 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.43□□□□□ -1.86
CDCA3Q99618 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.43□□□□□ -1.86
CDCA3Q99618 AC244098.2-201ENST00000422068 99 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 TXNL1P1-201ENST00000429528 554 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 AL590233.1-201ENST00000430017 456 ntBASIC3.43□□□□□ -1.86
CDCA3Q99618 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.43□□□□□ -1.86
CDCA3Q99618 AL606662.1-201ENST00000445763 553 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 162.5 ms