Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 Z92545.1-201ENST00000411782 234 ntBASIC2.56□□□□□ -2
VAT1Q99536 AL133384.1-201ENST00000412744 351 ntBASIC2.56□□□□□ -2
VAT1Q99536 AC246680.2-201ENST00000422106 389 ntBASIC2.56□□□□□ -2
VAT1Q99536 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC2.56□□□□□ -2
VAT1Q99536 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.56□□□□□ -2
VAT1Q99536 MTND4LP10-201ENST00000435146 291 ntBASIC2.56□□□□□ -2
VAT1Q99536 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.56□□□□□ -2
VAT1Q99536 RPL23AP58-201ENST00000440453 469 ntBASIC2.56□□□□□ -2
VAT1Q99536 AC002542.1-201ENST00000440683 193 ntBASIC2.56□□□□□ -2
VAT1Q99536 NDUFA5P7-201ENST00000452914 242 ntBASIC2.56□□□□□ -2
VAT1Q99536 AP000705.1-201ENST00000454567 350 ntBASIC2.56□□□□□ -2
VAT1Q99536 HESX1-202ENST00000473921 757 ntTSL 5 BASIC2.56□□□□□ -2
VAT1Q99536 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.56□□□□□ -2
VAT1Q99536 RNU6-27P-201ENST00000516146 107 ntBASIC2.56□□□□□ -2
VAT1Q99536 AC090136.1-201ENST00000520009 240 ntBASIC2.56□□□□□ -2
VAT1Q99536 CKS1BP7-201ENST00000522230 235 ntBASIC2.56□□□□□ -2
VAT1Q99536 DNAJC8P1-201ENST00000554535 372 ntBASIC2.56□□□□□ -2
VAT1Q99536 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.56□□□□□ -2
VAT1Q99536 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VAT1Q99536 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC2.56□□□□□ -2
VAT1Q99536 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.56□□□□□ -2
VAT1Q99536 AC091057.2-201ENST00000602594 792 ntBASIC2.56□□□□□ -2
VAT1Q99536 AL035413.2-201ENST00000604801 525 ntBASIC2.56□□□□□ -2
VAT1Q99536 AC055876.5-201ENST00000605667 259 ntBASIC2.56□□□□□ -2
VAT1Q99536 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
VAT1Q99536 MIR6076-201ENST00000617521 113 ntBASIC2.56□□□□□ -2
VAT1Q99536 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.56□□□□□ -2
VAT1Q99536 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.55□□□□□ -2
VAT1Q99536 MIR6073-201ENST00000352083 89 ntBASIC2.55□□□□□ -2
VAT1Q99536 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
VAT1Q99536 RNA5SP252-201ENST00000391131 119 ntBASIC2.55□□□□□ -2
VAT1Q99536 RPS4XP3-201ENST00000398541 413 ntBASIC2.55□□□□□ -2
VAT1Q99536 FAT1P1-201ENST00000406588 507 ntBASIC2.55□□□□□ -2
VAT1Q99536 MIR1289-1-201ENST00000408836 144 ntBASIC2.55□□□□□ -2
VAT1Q99536 NUP35P1-201ENST00000422734 947 ntBASIC2.55□□□□□ -2
VAT1Q99536 MTCO2P17-201ENST00000424336 677 ntBASIC2.55□□□□□ -2
VAT1Q99536 AC005345.1-201ENST00000431868 217 ntBASIC2.55□□□□□ -2
VAT1Q99536 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.55□□□□□ -2
VAT1Q99536 AL512661.1-201ENST00000434586 1253 ntBASIC2.55□□□□□ -2
VAT1Q99536 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
VAT1Q99536 AC025750.2-201ENST00000442609 450 ntBASIC2.55□□□□□ -2
VAT1Q99536 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.55□□□□□ -2
VAT1Q99536 OR6K5P-201ENST00000447050 945 ntBASIC2.55□□□□□ -2
VAT1Q99536 AL590664.1-201ENST00000448065 339 ntBASIC2.55□□□□□ -2
VAT1Q99536 AL096803.2-201ENST00000450032 677 ntBASIC2.55□□□□□ -2
VAT1Q99536 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.55□□□□□ -2
VAT1Q99536 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.55□□□□□ -2
VAT1Q99536 AL359385.1-201ENST00000456509 365 ntBASIC2.55□□□□□ -2
VAT1Q99536 AL031183.1-201ENST00000457667 207 ntBASIC2.55□□□□□ -2
VAT1Q99536 snoU109.4-201ENST00000458953 143 ntBASIC2.55□□□□□ -2
VAT1Q99536 RPL30P14-201ENST00000482744 348 ntBASIC2.55□□□□□ -2
VAT1Q99536 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.55□□□□□ -2
VAT1Q99536 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.55□□□□□ -2
VAT1Q99536 RPL21P131-201ENST00000497298 483 ntBASIC2.55□□□□□ -2
VAT1Q99536 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.55□□□□□ -2
VAT1Q99536 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC2.55□□□□□ -2
VAT1Q99536 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.55□□□□□ -2
VAT1Q99536 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
VAT1Q99536 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.55□□□□□ -2
VAT1Q99536 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.55□□□□□ -2
VAT1Q99536 AC026616.1-201ENST00000523157 525 ntBASIC2.55□□□□□ -2
VAT1Q99536 AP001804.3-201ENST00000525146 880 ntBASIC2.55□□□□□ -2
VAT1Q99536 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.55□□□□□ -2
VAT1Q99536 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.55□□□□□ -2
VAT1Q99536 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.55□□□□□ -2
VAT1Q99536 AL731537.2-201ENST00000561565 951 ntBASIC2.55□□□□□ -2
VAT1Q99536 AP005205.1-201ENST00000563503 508 ntBASIC2.55□□□□□ -2
VAT1Q99536 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.55□□□□□ -2
VAT1Q99536 AL356575.1-201ENST00000603008 283 ntBASIC2.55□□□□□ -2
VAT1Q99536 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
VAT1Q99536 VN1R7P-201ENST00000619242 903 ntBASIC2.55□□□□□ -2
VAT1Q99536 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.55□□□□□ -2
VAT1Q99536 AC091925.2-201ENST00000625059 256 ntBASIC2.55□□□□□ -2
VAT1Q99536 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.55□□□□□ -2
VAT1Q99536 AC233263.6-201ENST00000631132 1963 ntBASIC2.55□□□□□ -2
VAT1Q99536 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC2.55□□□□□ -2
VAT1Q99536 ZNF663P-202ENST00000641770 1131 ntBASIC2.55□□□□□ -2
VAT1Q99536 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.54□□□□□ -2
VAT1Q99536 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.54□□□□□ -2
VAT1Q99536 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.54□□□□□ -2
VAT1Q99536 RNU6-799P-201ENST00000363567 107 ntBASIC2.54□□□□□ -2
VAT1Q99536 MIR493-201ENST00000385254 89 ntBASIC2.54□□□□□ -2
VAT1Q99536 NPM1P10-201ENST00000398310 865 ntBASIC2.54□□□□□ -2
VAT1Q99536 AL162578.1-201ENST00000406202 378 ntBASIC2.54□□□□□ -2
VAT1Q99536 AL357078.2-201ENST00000416486 427 ntBASIC2.54□□□□□ -2
VAT1Q99536 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.54□□□□□ -2
VAT1Q99536 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.54□□□□□ -2
VAT1Q99536 AC091390.3-201ENST00000426478 338 ntBASIC2.54□□□□□ -2
VAT1Q99536 AC096576.1-201ENST00000489014 359 ntBASIC2.54□□□□□ -2
VAT1Q99536 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.54□□□□□ -2
VAT1Q99536 RN7SKP24-201ENST00000515888 284 ntBASIC2.54□□□□□ -2
VAT1Q99536 RNU6-1095P-201ENST00000516148 108 ntBASIC2.54□□□□□ -2
VAT1Q99536 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC2.54□□□□□ -2
VAT1Q99536 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms