Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC092447.6-201ENST00000414578 210 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC019097.1-201ENST00000424783 735 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 RPS27AP12-201ENST00000429552 465 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 MRPS10P2-201ENST00000431226 381 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 CKS1BP5-201ENST00000434172 273 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 ARPC3P1-201ENST00000437218 533 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 RPL23AP33-201ENST00000442301 452 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 Z95327.1-201ENST00000446082 482 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 Z99127.3-201ENST00000448158 395 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS50Q96JG6 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 HMGB1P25-201ENST00000468402 607 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL121769.1-201ENST00000469473 401 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC055855.1-201ENST00000489563 579 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC114967.1-201ENST00000504890 259 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 NDUFB4P9-201ENST00000511646 388 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 NPM1P41-201ENST00000512920 831 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 MTCO1P35-201ENST00000515270 228 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AP003730.1-201ENST00000524605 285 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AP004242.1-201ENST00000533701 349 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL356432.3-201ENST00000568952 465 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 MIR3682-201ENST00000581338 84 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 MIR3138-201ENST00000585238 82 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AP000860.1-201ENST00000605250 559 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL034351.1-201ENST00000605288 668 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC024941.1-201ENST00000612250 334 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC090517.2-201ENST00000614966 680 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 AL590099.1-201ENST00000615276 138 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 CR381653.2-201ENST00000624041 768 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 MIR6863-201ENST00000636112 90 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 LRRC77P-213ENST00000637727 880 ntBASIC4.1□□□□□ -1.75
VPS50Q96JG6 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
VPS50Q96JG6 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
VPS50Q96JG6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.1□□□□□ -1.75
VPS50Q96JG6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS50Q96JG6 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS50Q96JG6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC090337.1-201ENST00000579651 2074 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 RNU4-1-201ENST00000363925 141 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 Y_RNA.248-201ENST00000364501 109 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 Y_RNA.372-201ENST00000365599 102 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 SNORD51-201ENST00000384320 80 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 RNU6-114P-201ENST00000384704 105 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 CALM2P3-201ENST00000400429 449 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 RNU2-47P-201ENST00000410649 186 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 SNRPFP1-201ENST00000414761 252 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC108032.1-201ENST00000416706 207 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL596276.1-201ENST00000434465 418 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL138799.3-201ENST00000438968 350 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL356535.1-201ENST00000440335 398 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC112653.1-201ENST00000443851 386 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC003071.1-201ENST00000451219 789 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 RN7SL585P-201ENST00000470538 280 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC020893.1-201ENST00000502452 580 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 KCTD9P5-201ENST00000504141 1170 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC025554.1-201ENST00000505641 188 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
VPS50Q96JG6 TMEM248P1-201ENST00000510579 951 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 ARL2BPP6-201ENST00000512757 439 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC017037.2-201ENST00000513850 890 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 SNORA70.14-201ENST00000516205 110 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 RNA5SP73-201ENST00000516744 108 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 NARSP2-201ENST00000518524 679 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 FAM92A1P1-201ENST00000528023 890 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC4.09□□□□□ -1.75
VPS50Q96JG6 AP000907.2-201ENST00000530827 353 ntBASIC4.09□□□□□ -1.75
VPS50Q96JG6 AL109766.1-201ENST00000555080 552 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms