Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 AC138915.2-201ENST00000569776 97 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC006130.2-201ENST00000586202 326 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 HMGN1P30-201ENST00000589286 268 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC103710.3-201ENST00000608157 948 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 AL355472.4-201ENST00000610233 626 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 AC087588.2-201ENST00000617667 426 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHFRQ96EP1 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHFRQ96EP1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 NMD3P1-201ENST00000439704 1488 ntBASIC4.49□□□□□ -1.69
CHFRQ96EP1 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
CHFRQ96EP1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.49□□□□□ -1.69
CHFRQ96EP1 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 MTCO1P14-201ENST00000441695 1559 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC107982.1-201ENST00000507171 1300 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 RNU6-1339P-201ENST00000363574 91 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 Y_RNA.193-201ENST00000363979 102 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 Y_RNA.259-201ENST00000364619 101 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC097374.1-203ENST00000400783 485 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AL592291.1-201ENST00000403830 352 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AL162578.1-201ENST00000406202 378 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 TXNP7-201ENST00000406296 293 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 RPS20P14-201ENST00000412545 360 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 NPM1P34-201ENST00000428821 893 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC109583.1-201ENST00000432156 268 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 RPL36AP53-201ENST00000432891 316 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC105402.2-201ENST00000438503 358 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 SUMO1P3-201ENST00000439961 304 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 HSPE1P28-201ENST00000443139 211 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 MTND1P12-201ENST00000455231 147 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 RPL18AP17-201ENST00000455326 198 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 RPL21P71-201ENST00000465598 459 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 MTND1P3-201ENST00000484956 952 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 RPS3AP50-201ENST00000487064 803 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 RPS27AP13-201ENST00000498403 237 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 HMGB1P28-201ENST00000507778 552 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 FTH1P9-201ENST00000513251 355 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 RNU6-1170P-201ENST00000515974 106 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 Y_RNA.691-201ENST00000516611 103 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 RNU6-445P-201ENST00000516949 107 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 SCOCP1-201ENST00000554676 349 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 TRAV15-201ENST00000556680 249 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC004817.2-201ENST00000561794 651 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 MIR4307-201ENST00000582802 84 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC112187.2-201ENST00000604345 283 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AC004825.2-201ENST00000616634 455 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 AL732618.1-201ENST00000623251 301 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CHFRQ96EP1 MTND5P33-201ENST00000571250 1450 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 CKAP2P1-201ENST00000555477 2049 ntBASIC4.48□□□□□ -1.69
CHFRQ96EP1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CHFRQ96EP1 LINC01355-201ENST00000566551 5444 ntBASIC4.47□□□□□ -1.69
CHFRQ96EP1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHFRQ96EP1 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHFRQ96EP1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHFRQ96EP1 GTF2H2B-203ENST00000508065 1432 ntBASIC4.47□□□□□ -1.69
CHFRQ96EP1 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CHFRQ96EP1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHFRQ96EP1 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHFRQ96EP1 AL133243.3-201ENST00000617415 3004 ntBASIC4.47□□□□□ -1.69
CHFRQ96EP1 ANKRD26P2-201ENST00000445530 1710 ntBASIC4.47□□□□□ -1.69
CHFRQ96EP1 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.47□□□□□ -1.69
CHFRQ96EP1 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CHFRQ96EP1 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CHFRQ96EP1 OR5J1P-201ENST00000313544 939 ntBASIC4.47□□□□□ -1.69
CHFRQ96EP1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.47□□□□□ -1.69
CHFRQ96EP1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms