Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.83□□□□□ -1.64
SH3RF3Q8TEJ3 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL049555.1-201ENST00000562834 1933 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 Y_RNA.128-201ENST00000363391 112 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-619P-201ENST00000365146 108 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-1318P-201ENST00000365389 103 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 OR52E6-202ENST00000379946 954 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-213P-201ENST00000384051 104 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 Y_RNA.422-201ENST00000384054 114 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-784P-201ENST00000384330 106 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-331P-201ENST00000384724 107 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 MIR525-201ENST00000384978 85 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-1300P-201ENST00000391046 108 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL354719.1-201ENST00000406535 843 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RPL23AP47-201ENST00000408017 460 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC092745.2-202ENST00000411880 369 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 MTCO2P5-201ENST00000422621 426 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL445669.1-201ENST00000426743 755 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL365400.1-201ENST00000431854 640 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC016691.1-201ENST00000441321 413 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 RPL23AP20-201ENST00000447965 421 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC132479.1-201ENST00000449160 144 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL590365.1-201ENST00000450788 243 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC007687.1-201ENST00000602704 304 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AL451044.1-201ENST00000604867 238 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC245389.1-201ENST00000605141 529 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 PISRT1-201ENST00000626175 531 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 TPTEP1-208ENST00000636884 213 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 MAPK10-320ENST00000641462 6696 ntBASIC4.82□□□□□ -1.64
SH3RF3Q8TEJ3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC024560.2-201ENST00000507981 1497 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 SNORA33.2-201ENST00000365413 134 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 SNORA4.3-201ENST00000365564 137 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-98P-201ENST00000384173 107 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-1105P-201ENST00000384774 107 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 MIR554-201ENST00000384874 96 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 U8.14-201ENST00000390843 143 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AL359704.1-201ENST00000411586 781 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC234782.4-201ENST00000417646 1048 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AL445584.1-201ENST00000431451 330 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AL513175.1-201ENST00000431492 780 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC005008.1-201ENST00000456151 612 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC130509.1-201ENST00000464158 433 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC007182.2-201ENST00000489251 402 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 RPL21P129-201ENST00000491732 478 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC103851.1-201ENST00000506833 274 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 CCDC34P1-201ENST00000507441 517 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 SNORA67.7-201ENST00000516664 135 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 RNU7-30P-201ENST00000516835 62 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 RNU6-352P-201ENST00000516908 107 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 RNU2-46P-201ENST00000517038 113 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 DNAJC8P1-201ENST00000554535 372 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 RPL21P5-201ENST00000554662 472 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 MIR5685-201ENST00000579080 79 ntBASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.81□□□□□ -1.64
SH3RF3Q8TEJ3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms