Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AL731566.1-201ENST00000620490 1937 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 PCAT14-202ENST00000627127 3935 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 RNU4-26P-201ENST00000410270 107 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 ARL5AP1-201ENST00000418991 388 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 ELOCP18-201ENST00000434209 337 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 MTATP6P16-201ENST00000434543 526 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 MRPL50P4-201ENST00000446432 475 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 MTND1P18-201ENST00000448191 573 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 SNORD97-201ENST00000459187 142 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC108751.2-201ENST00000469993 231 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC007537.2-201ENST00000472093 511 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 RPL23AP11-201ENST00000475260 469 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC103851.1-201ENST00000506833 274 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 RN7SKP219-201ENST00000516825 296 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 IGKV2D-36-201ENST00000518643 226 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 HMGB1P41-201ENST00000520234 440 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AP003385.6-201ENST00000531603 374 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 RNF138P2-201ENST00000603490 592 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AL050343.2-201ENST00000607338 280 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC093838.1-201ENST00000613014 469 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC114781.5-201ENST00000615297 108 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC068831.8-201ENST00000620171 435 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AL160413.1-201ENST00000622780 310 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 DHX9P1-201ENST00000436565 3076 ntBASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.68□□□□□ -1.66
SH3RF2Q8TEC5 AC090971.4-201ENST00000560291 1800 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC006971.1-201ENST00000407916 4486 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 MFSD8-242ENST00000641690 4199 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL136372.1-201ENST00000403060 228 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL353678.1-201ENST00000422735 741 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC004975.1-201ENST00000428733 208 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 MRPL48P1-201ENST00000445390 636 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 PHBP16-201ENST00000446318 950 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 RPL23AP43-201ENST00000446445 471 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL121877.1-201ENST00000453704 622 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC005008.1-201ENST00000456151 612 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 CYCSP34-201ENST00000458172 304 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 RN7SL98P-201ENST00000462271 300 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 MRPS17P3-201ENST00000465453 385 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC026427.2-201ENST00000506228 536 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 RN7SKP256-201ENST00000517201 314 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC103783.1-201ENST00000520506 373 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC107953.1-201ENST00000522216 297 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 FAM60DP-201ENST00000524174 632 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC015912.2-201ENST00000571053 181 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 MIR4775-201ENST00000581168 75 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC006272.2-201ENST00000594725 163 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL031176.1-201ENST00000604554 466 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 ARF4P1-201ENST00000605447 541 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL008729.2-201ENST00000606393 473 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 RNU6-89P-201ENST00000606519 100 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AL022345.1-201ENST00000607292 135 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 AC005858.4-201ENST00000623191 700 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 MIR1302-1-201ENST00000637932 143 ntBASIC4.67□□□□□ -1.66
SH3RF2Q8TEC5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms