Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 HMGB3P12-201ENST00000438745 556 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC104651.2-201ENST00000447549 528 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC026979.1-201ENST00000492525 396 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC010486.1-201ENST00000511793 424 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RNA5SP497-201ENST00000516081 97 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-1003P-201ENST00000517099 105 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 HPRT1P3-201ENST00000539521 576 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC093027.1-201ENST00000546698 429 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC007424.1-203ENST00000554613 687 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC011712.1-201ENST00000588959 234 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL161729.3-201ENST00000603533 673 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC007621.1-201ENST00000604544 437 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 RMST_3.1-201ENST00000611651 109 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 A2MP1-204ENST00000566278 4130 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AL365440.1-201ENST00000436135 2167 ntBASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.31□□□□□ -1.72
SIMC1Q8NDZ2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 DHX40P1-201ENST00000588725 1412 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-1249P-201ENST00000363237 111 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.159-201ENST00000363674 87 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RNY3P3-201ENST00000363816 102 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 SNORD81.2-201ENST00000365153 76 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 Y_RNA.326-201ENST00000365176 113 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RNA5SP151-201ENST00000365632 117 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RNU6-1181P-201ENST00000384191 106 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 MIR921-201ENST00000401133 56 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RPS20P2-201ENST00000402520 389 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RN7SKP177-201ENST00000410567 355 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RNA5SP39-201ENST00000411245 120 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 PDCL2P1-201ENST00000419302 352 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AL592293.2-201ENST00000422292 996 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 Z74021.1-201ENST00000423610 407 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 TAAR7P-201ENST00000436141 242 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 NDUFA5P4-201ENST00000436704 385 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 HMGN2P21-201ENST00000447764 270 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC005297.2-201ENST00000450430 606 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AP001992.1-205ENST00000462248 379 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AP000926.1-201ENST00000479573 241 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 RPL36AP51-201ENST00000487216 318 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC078817.1-201ENST00000492623 435 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC025164.1-201ENST00000496249 478 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 COX7A2P2-201ENST00000505291 250 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 SLC25A15P5-201ENST00000508033 253 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AP003181.2-201ENST00000528941 181 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 SNRPGP15-201ENST00000600149 222 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AC013553.2-201ENST00000604244 589 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 COX6CP4-201ENST00000605798 228 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 HMGN2P28-201ENST00000606102 262 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AL161734.1-201ENST00000609720 557 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AL132765.2-201ENST00000610812 351 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 MIR4727-201ENST00000622232 55 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 U3.53-201ENST00000628922 216 ntBASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.3□□□□□ -1.72
SIMC1Q8NDZ2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms