Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 AC093019.1-201ENST00000443135 252 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 RPS4XP10-201ENST00000465034 731 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AC010683.1-201ENST00000473673 378 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 RNA5SP497-201ENST00000516081 97 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 RN7SL690P-201ENST00000582087 240 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AC234771.5-201ENST00000600161 514 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 YWHAQP7-201ENST00000603536 658 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AC007038.2-201ENST00000608095 740 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 DISC2.1-201ENST00000612827 205 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AC233309.1-201ENST00000619522 751 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 MIR4727-201ENST00000622232 55 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AC006020.1-201ENST00000420179 1854 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 AL138713.1-201ENST00000624026 2130 ntBASIC3.88□□□□□ -1.79
PNLDC1Q8NA58 DHX40P1-201ENST00000588725 1412 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 RNU1-15P-201ENST00000353977 144 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 Y_RNA.22-201ENST00000362492 102 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 RNA5SP307-201ENST00000362863 116 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 SNORD74.4-201ENST00000364129 80 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 RNA5SP151-201ENST00000365632 117 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 XGY1-201ENST00000381172 446 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 RNU6-767P-201ENST00000384132 107 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 RNU6-39P-201ENST00000384344 107 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC008850.1-201ENST00000427546 362 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC012671.1-201ENST00000451912 203 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 HSPD1P15-201ENST00000505573 1122 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 FGF7P4-201ENST00000509595 295 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC006499.6-201ENST00000511169 607 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC015795.1-201ENST00000513669 327 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 SNORD27.1-201ENST00000516319 72 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC068831.4-201ENST00000556118 109 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 MIR4716-201ENST00000579628 84 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC105224.1-201ENST00000587055 421 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC098848.2-201ENST00000588023 330 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 GLUD1P4-201ENST00000590914 418 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 KC877982.1-201ENST00000602313 470 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC245517.5-201ENST00000611529 162 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC135507.2-201ENST00000612443 309 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC112204.3-201ENST00000623822 332 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC007546.2-201ENST00000623996 360 ntBASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PNLDC1Q8NA58 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms