Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 MTND5P19-201ENST00000424872 1794 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 RPL21P132-201ENST00000331267 462 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 DEFB109C-201ENST00000382575 264 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 DEFB109B-201ENST00000382656 264 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC007066.1-201ENST00000392902 381 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL590084.2-201ENST00000401481 382 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 ATP5A1P2-201ENST00000412323 255 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL807761.1-201ENST00000417622 171 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 DUTP6-201ENST00000425573 462 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 C4BPAP2-201ENST00000428434 478 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL035407.1-201ENST00000429211 571 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 MTND1P20-201ENST00000430341 950 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 SNRPEP7-201ENST00000438350 220 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL591503.2-201ENST00000442314 1005 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 MTND5P2-201ENST00000442927 1142 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 OR6C5P-201ENST00000452388 923 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 snoU13.4-201ENST00000458916 104 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC004062.1-201ENST00000509926 645 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 CR383656.7-201ENST00000548164 174 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 OR4H12P-201ENST00000556269 907 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC090615.1-201ENST00000577519 154 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC006557.5-201ENST00000603126 811 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL590392.1-201ENST00000604960 446 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AC090186.1-201ENST00000605991 572 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL590240.3-201ENST00000621416 943 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 AL356596.1-201ENST00000624230 379 ntBASIC3.36□□□□□ -1.87
CCDC63Q8NA47 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC63Q8NA47 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RNU6-50P-201ENST00000362356 103 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RNA5SP197-201ENST00000363357 119 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RNU6-723P-201ENST00000383973 107 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RN7SKP123-201ENST00000410732 291 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RN7SKP58-201ENST00000411010 305 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 BMS1P22-201ENST00000414726 313 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC083875.1-201ENST00000419509 405 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AL035423.1-201ENST00000420331 213 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 ST13P14-201ENST00000474095 734 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC024589.1-201ENST00000512207 263 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RNU6-714P-201ENST00000516963 103 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC015917.1-201ENST00000579654 510 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AL109653.1-201ENST00000603091 248 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AP000811.1-201ENST00000603803 651 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 DUXAP11-201ENST00000603858 526 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AC018638.7-201ENST00000605836 1114 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RNU6-88P-201ENST00000606801 100 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 AP003485.2-201ENST00000623636 610 ntBASIC3.35□□□□□ -1.87
CCDC63Q8NA47 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC63Q8NA47 RNA5SP88-201ENST00000365560 109 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 SNORA56-201ENST00000383966 129 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 RNU6-1074P-201ENST00000383995 104 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 MIR135A2-201ENST00000384854 100 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 AC107081.1-201ENST00000414975 361 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 OR1AA1P-201ENST00000419597 916 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 UBE2D3P1-201ENST00000436669 444 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 CST9LP2-201ENST00000437612 320 ntBASIC3.34□□□□□ -1.87
CCDC63Q8NA47 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC63Q8NA47 GAPDHP27-201ENST00000447427 1020 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms