Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AP001025.2-201ENST00000490908 477 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC016550.1-201ENST00000505348 785 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 SEM1P1-201ENST00000506694 209 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC009901.1-201ENST00000506703 541 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC104417.1-201ENST00000523974 751 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AP000857.1-201ENST00000532151 543 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC090502.2-201ENST00000549267 280 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 LARP7P2-201ENST00000575306 125 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC091946.2-201ENST00000606105 291 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC006329.2-201ENST00000611491 394 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC002076.2-201ENST00000617362 122 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AL157770.1-201ENST00000623049 439 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC002064.3-201ENST00000623448 346 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AC040168.1-201ENST00000623594 991 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 AL355596.1-201ENST00000565399 3996 ntBASIC3.09□□□□□ -1.91
CCDC65Q8IXS2 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CCDC65Q8IXS2 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 SNORD82-201ENST00000365530 70 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC016769.3-201ENST00000396562 315 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AL512633.1-201ENST00000399931 655 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC069282.1-201ENST00000411911 526 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AL645937.1-202ENST00000421799 937 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AIG1P1-201ENST00000503376 148 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC022690.1-201ENST00000526681 550 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC068339.2-201ENST00000534395 618 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC087894.1-201ENST00000538359 518 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC138761.3-201ENST00000579993 334 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC126365.2-201ENST00000580630 379 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AL355812.1-201ENST00000603215 216 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 DPRXP5-201ENST00000604662 539 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC005046.1-201ENST00000608515 625 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AL592148.2-201ENST00000612210 372 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AC010975.3-201ENST00000618727 978 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 AL645568.2-201ENST00000432815 1337 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
CCDC65Q8IXS2 NUP58P1-201ENST00000502546 1738 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 SNORA18.3-201ENST00000384122 132 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 SNORA9-201ENST00000384215 133 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 MIR128-1-201ENST00000384921 82 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AL079342.2-201ENST00000403367 482 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 RPL7P27-201ENST00000403775 720 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AL024474.1-201ENST00000404655 591 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 RPL23AP11-201ENST00000475260 469 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC093767.1-201ENST00000504523 156 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC008837.1-201ENST00000511513 412 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC090079.2-201ENST00000575289 768 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC012669.1-201ENST00000603209 283 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AL161756.2-201ENST00000604597 246 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC008277.2-201ENST00000605196 797 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AL133507.1-201ENST00000605269 557 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 MIR6733-201ENST00000635723 61 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 AC244517.1-201ENST00000606030 2086 ntBASIC3.07□□□□□ -1.92
CCDC65Q8IXS2 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 SNORA48.2-201ENST00000390926 124 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AL590004.2-201ENST00000404787 371 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 RNU6-712P-201ENST00000410558 100 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC096533.1-201ENST00000411645 353 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 HMGN2P30-201ENST00000423237 256 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 CYCSP32-201ENST00000440548 321 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 MTCYBP42-201ENST00000444653 1130 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 MTCO1P48-201ENST00000448024 1096 ntBASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC65Q8IXS2 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms