Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC106900.2-201ENST00000604994 317 ntBASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 AC005332.6-201ENST00000613178 446 ntBASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 AC107982.1-201ENST00000507171 1300 ntBASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 OR5BR1P-201ENST00000524992 1330 ntBASIC2.86□□□□□ -1.95
NUDCD3Q8IVD9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-216P-201ENST00000363282 104 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-1155P-201ENST00000363554 107 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-799P-201ENST00000363567 107 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 RNU2-47P-201ENST00000410649 186 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 RPL19P1-201ENST00000411635 428 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL161449.1-201ENST00000414531 1199 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 RPL7P44-201ENST00000424827 742 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 YME1L1P1-201ENST00000429435 297 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL159987.2-201ENST00000432754 307 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC092427.1-201ENST00000439177 601 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 MTCYBP11-201ENST00000447254 1109 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL589880.1-201ENST00000448271 287 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC034236.1-201ENST00000469891 373 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 RPS15AP17-201ENST00000470598 390 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC103975.1-201ENST00000482506 483 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AP003102.1-201ENST00000525638 661 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC024224.1-201ENST00000538284 609 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 MED28P6-201ENST00000558776 231 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 MIR3912-201ENST00000577566 105 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL606834.3-201ENST00000602615 496 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL606834.2-201ENST00000602954 668 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 ELOCP35-201ENST00000604289 336 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 BNIP3P31-201ENST00000604515 566 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC106791.2-201ENST00000604680 391 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC112220.2-201ENST00000605513 533 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC024060.1-201ENST00000607052 494 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC106028.5-201ENST00000610332 395 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AL356585.4-201ENST00000623078 1229 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 AC120349.2-201ENST00000625002 298 ntBASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NUDCD3Q8IVD9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC091564.4-201ENST00000533934 2194 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 snoZ40.1-201ENST00000364540 72 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 MIR183-201ENST00000384958 110 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 RNU6-1000P-201ENST00000391066 106 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 RNA5SP252-201ENST00000391131 119 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 RN7SKP220-201ENST00000410611 288 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 RAP1BP1-201ENST00000412709 553 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 RPS15AP38-201ENST00000413110 372 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 OR4K6P-201ENST00000416478 897 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC007435.1-201ENST00000421086 415 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 RPL23AP74-201ENST00000437246 471 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 USP9YP22-201ENST00000438971 294 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 MTCYBP34-201ENST00000439552 670 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC005297.2-201ENST00000450430 606 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC026410.2-201ENST00000460281 156 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 RN7SL297P-201ENST00000483161 293 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 SNORA9.3-201ENST00000516383 129 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 OR5AK1P-201ENST00000524837 922 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 ELOCP31-201ENST00000540463 467 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC125611.2-201ENST00000551907 647 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 SETP7-201ENST00000552169 453 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AL022099.1-201ENST00000604551 712 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC069545.1-201ENST00000605671 358 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC084757.4-201ENST00000616350 526 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AC104985.3-201ENST00000623479 597 ntBASIC2.84□□□□□ -1.95
NUDCD3Q8IVD9 AP002371.2-201ENST00000624450 503 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms