Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC006989.1-201ENST00000427212 131 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 LSM1P1-201ENST00000438629 273 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AL109741.2-201ENST00000455561 343 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 RNA5SP310-201ENST00000459084 116 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC093809.1-201ENST00000509155 340 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 SNORA70.16-201ENST00000516390 95 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 RN7SKP60-201ENST00000516985 239 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 RANP9-201ENST00000519957 271 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AP003461.1-201ENST00000528866 78 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 UBE2NP1-201ENST00000545592 458 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AL357094.1-201ENST00000603845 844 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC006077.1-201ENST00000604746 343 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC012468.1-201ENST00000604888 430 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC013244.3-201ENST00000605614 388 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC072039.2-201ENST00000608883 439 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 MIR7851-201ENST00000610611 160 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 MIR6130-201ENST00000619419 109 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 AC007823.1-201ENST00000569932 1566 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 ZNF542P-204ENST00000482727 1305 ntBASIC3.66□□□□□ -1.82
PRPF39Q86UA1 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.66□□□□□ -1.82
PRPF39Q86UA1 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
PRPF39Q86UA1 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 SNORD9-201ENST00000362566 104 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 RNA5SP50-201ENST00000363731 107 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 Y_RNA.548-201ENST00000384656 105 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 RPL23AP83-201ENST00000434984 473 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC092641.1-201ENST00000440229 772 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 MTCO1P27-201ENST00000448269 226 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 ARPC3P2-201ENST00000457786 533 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AL049714.1-201ENST00000466686 347 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 MTND2P14-201ENST00000482139 351 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC034222.1-201ENST00000494052 532 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC074250.1-201ENST00000511117 192 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 RNU6-579P-201ENST00000516879 102 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 EEF1A1P37-201ENST00000522748 715 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 MIR4474-201ENST00000579189 78 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC006116.10-201ENST00000591836 581 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC004067.1-201ENST00000608733 700 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AC079597.1-201ENST00000624306 508 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AL159972.1-201ENST00000625150 448 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 U6.105-201ENST00000637379 88 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 AL392088.2-201ENST00000637607 285 ntBASIC3.65□□□□□ -1.83
PRPF39Q86UA1 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PRPF39Q86UA1 CUL1P1-201ENST00000509510 2425 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 PWAR6-201ENST00000552334 4618 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 Y_RNA.18-201ENST00000362461 102 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 RNU6-1214P-201ENST00000363650 109 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 RNA5SP88-201ENST00000365560 109 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 RNU6-114P-201ENST00000384704 105 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 U3.42-201ENST00000408746 214 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 BX842559.1-201ENST00000419615 532 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AC010099.3-201ENST00000423896 409 ntBASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.64□□□□□ -1.83
PRPF39Q86UA1 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 153.5 ms