Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
ATG4DQ86TL0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.20-201ENST00000362479 113 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 SNORD62.1-201ENST00000362541 86 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RNY3P11-201ENST00000364153 102 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.297-201ENST00000364950 91 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RNA5SP223-201ENST00000365174 120 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 Y_RNA.416-201ENST00000384014 113 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 SNORA41-201ENST00000384675 132 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AL024474.1-201ENST00000404655 591 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC243772.1-201ENST00000451620 410 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 TRBV26-201ENST00000456572 344 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RN7SL172P-201ENST00000460535 303 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC117503.1-201ENST00000472241 394 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RN7SL222P-201ENST00000476452 299 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC011005.2-201ENST00000487324 359 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RN7SL30P-201ENST00000488416 306 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC026979.1-201ENST00000492525 396 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC083829.1-201ENST00000503756 657 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RBBP4P6-201ENST00000508098 202 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RNU6-1069P-201ENST00000516612 133 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC100784.1-201ENST00000522790 310 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC091516.1-201ENST00000549191 703 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 MIR3941-201ENST00000582572 103 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 MIR4660-201ENST00000583549 74 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AL161423.1-201ENST00000613700 262 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 AC118658.2-201ENST00000618697 459 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 CYP4F35P-202ENST00000636121 390 ntBASIC4.75□□□□□ -1.65
ATG4DQ86TL0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
ATG4DQ86TL0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AC009313.2-201ENST00000417893 1941 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 U3.3-201ENST00000362986 216 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 SNORD113-1-201ENST00000365321 69 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RNU6-128P-201ENST00000383976 107 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RNU6-842P-201ENST00000384269 107 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RPL21P67-201ENST00000402896 478 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RNU4-34P-201ENST00000410431 124 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RPL21P109-201ENST00000422213 475 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AC093655.2-201ENST00000425735 631 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AL158071.1-201ENST00000430315 461 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 CYCSP24-201ENST00000445119 316 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 OR2AQ1P-201ENST00000451972 200 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 MTCO3P8-201ENST00000453691 755 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AP001992.1-205ENST00000462248 379 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 PLGLA-201ENST00000465668 449 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AL136126.1-201ENST00000473603 402 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 TRBVB-201ENST00000477100 408 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 SNORA14.1-201ENST00000516113 141 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RNU6-307P-201ENST00000516743 106 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 SNORA40.15-201ENST00000516884 107 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RN7SKP96-201ENST00000516948 297 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 RNU6-323P-201ENST00000521915 107 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AC090517.1-201ENST00000569307 266 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AC005899.2-201ENST00000584353 90 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AC069307.1-201ENST00000602820 447 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 U2.17-201ENST00000611454 95 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 AL731566.2-201ENST00000618971 317 ntBASIC4.74□□□□□ -1.65
ATG4DQ86TL0 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
ATG4DQ86TL0 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
ATG4DQ86TL0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms