Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 OR52B1P-201ENST00000316506 909 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AL031679.1-201ENST00000400616 525 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AL024474.1-201ENST00000404655 591 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 ATP5A1P2-201ENST00000412323 255 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC002381.1-201ENST00000447049 280 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC027673.1-201ENST00000456245 405 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC013267.1-201ENST00000458227 267 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 RPL31P58-201ENST00000469001 379 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC012170.1-201ENST00000495139 359 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 IGKV2D-19-201ENST00000523346 262 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC008011.1-201ENST00000545989 227 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 MIR3682-201ENST00000581338 84 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AL357078.3-201ENST00000607528 618 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC092954.2-201ENST00000609103 430 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 FAM157B-203ENST00000639350 358 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC095050.2-201ENST00000510748 1458 ntBASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
UBE3BQ7Z3V4 AC018555.1-201ENST00000567548 1980 ntBASIC4.65□□□□□ -1.66
UBE3BQ7Z3V4 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.65□□□□□ -1.66
UBE3BQ7Z3V4 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
UBE3BQ7Z3V4 AC074029.4-201ENST00000624796 1859 ntBASIC4.65□□□□□ -1.66
UBE3BQ7Z3V4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.65□□□□□ -1.66
UBE3BQ7Z3V4 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
UBE3BQ7Z3V4 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 U8.3-201ENST00000363321 132 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 Y_RNA.256-201ENST00000364594 104 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 RNA5SP424-201ENST00000390988 115 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 GSTA9P-201ENST00000406231 611 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 JKAMPP1-201ENST00000413804 919 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC245052.5-201ENST00000416320 649 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC068533.1-201ENST00000418542 415 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 RPS12P5-201ENST00000423449 371 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 TIMM9P3-201ENST00000428659 274 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 HSPD1P21-201ENST00000436541 245 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 MTATP6P30-201ENST00000443540 664 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 RPS3AP46-201ENST00000448352 682 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC104073.1-201ENST00000451988 151 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC104563.1-201ENST00000476147 376 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC106707.2-201ENST00000484182 374 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 PTGES3P3-201ENST00000511479 482 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 RN7SKP18-201ENST00000516005 275 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC022861.1-201ENST00000522981 663 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 MIR4504-201ENST00000577413 92 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AL353997.4-201ENST00000586196 166 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC004067.1-201ENST00000608733 700 ntBASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
UBE3BQ7Z3V4 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 MIR208A-201ENST00000362287 71 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 Y_RNA.9-201ENST00000362354 101 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 Y_RNA.296-201ENST00000364930 108 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 RNU5E-4P-201ENST00000364931 120 ntBASIC4.64□□□□□ -1.67
UBE3BQ7Z3V4 RNU6-1226P-201ENST00000384317 107 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms