Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC002075.2-201ENST00000425207 252 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AL138799.3-201ENST00000438968 350 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AL360221.1-201ENST00000445989 335 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AL592447.1-201ENST00000447592 540 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 SNRPGP3-201ENST00000469405 227 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 RN7SL330P-201ENST00000469709 307 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 FAM172BP-201ENST00000487497 1089 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC104619.4-201ENST00000510773 249 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 MED28P5-201ENST00000528254 438 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AL139174.1-201ENST00000531489 886 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC024909.2-201ENST00000553035 286 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 MIR4307-201ENST00000582802 84 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC012065.4-201ENST00000602445 679 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 U7.8-201ENST00000619968 63 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AL161637.1-201ENST00000622380 412 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC091925.2-201ENST00000625059 256 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 U6.98-201ENST00000637157 84 ntBASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.17□□□□□ -1.74
SYNE3Q6ZMZ3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 PWAR6-201ENST00000552334 4618 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AL161781.1-201ENST00000354277 403 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 RNA5SP124-201ENST00000362739 110 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 RNA5SP258-201ENST00000362750 119 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 Y_RNA.234-201ENST00000364409 97 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 SNORA62.3-201ENST00000365110 153 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 RNU2-15P-201ENST00000410692 191 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 RNU2-37P-201ENST00000410695 177 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 BTF3L4P1-201ENST00000413813 468 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 RPS7P13-201ENST00000413955 498 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 RPL30P2-201ENST00000414021 291 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC016907.1-201ENST00000419483 435 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 ARF4P2-201ENST00000430209 526 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC010153.1-201ENST00000432862 727 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 MTCYBP45-201ENST00000435243 565 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 RPS29P31-201ENST00000446147 164 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC021146.1-201ENST00000511202 716 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 Y_RNA.695-201ENST00000516715 107 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 SETP7-201ENST00000552169 453 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC034105.4-201ENST00000568304 277 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC006270.2-201ENST00000578523 652 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC083760.1-201ENST00000589621 670 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AL034408.1-202ENST00000636088 415 ntBASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SYNE3Q6ZMZ3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.15□□□□□ -1.74
SYNE3Q6ZMZ3 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 Y_RNA.318-201ENST00000365131 97 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 PTMAP2-201ENST00000397627 327 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 RPL17P12-201ENST00000413391 526 ntBASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.15□□□□□ -1.75
SYNE3Q6ZMZ3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms