Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPL9P32-201ENST00000464118 620 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AC021382.1-201ENST00000483523 359 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 RN7SL814P-201ENST00000487715 300 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AC083829.1-201ENST00000503756 657 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 RN7SKP276-201ENST00000516242 268 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 RNU6-1069P-201ENST00000516612 133 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 CASP1-212ENST00000531166 300 ntTSL 5 BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AP002770.2-201ENST00000543613 532 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AC091516.1-201ENST00000549191 703 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 PARP1P2-201ENST00000556806 195 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 HSPE1P14-201ENST00000605812 302 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 AC074029.4-201ENST00000624796 1859 ntBASIC6.42□□□□□ -1.38
RC3H1Q5TC82 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RC3H1Q5TC82 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 BDP1P-201ENST00000582658 1990 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 RNU6-48P-201ENST00000384161 107 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 SNORA24.1-201ENST00000384401 135 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 RNU6-1127P-201ENST00000384580 107 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 RNU6-95P-201ENST00000384697 107 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC114491.1-201ENST00000416095 246 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 MRPS18BP2-201ENST00000434310 759 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC005154.2-201ENST00000438110 379 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC004383.1-201ENST00000438135 289 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 RPS3AP12-201ENST00000443616 753 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 CHEK2P4-201ENST00000450340 246 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 MTCO3P8-201ENST00000453691 755 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 HMGB1P4-201ENST00000455362 567 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AL139109.1-201ENST00000455491 297 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 DYNLL1P5-201ENST00000467158 270 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC087879.1-201ENST00000474343 374 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AP002812.1-201ENST00000495378 474 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 TBCAP3-201ENST00000512475 312 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC097486.1-201ENST00000515331 210 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 RNU6-1332P-201ENST00000516666 104 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 TOMM20P2-201ENST00000540082 421 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC090115.3-201ENST00000553218 849 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AL358913.1-201ENST00000554342 121 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AL049839.1-201ENST00000556151 657 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ATP5J2P6-201ENST00000565203 266 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 AC010620.2-201ENST00000600135 313 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 CR381572.2-201ENST00000624852 397 ntBASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
RC3H1Q5TC82 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 RNY1-201ENST00000364228 113 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 RNU6-441P-201ENST00000384545 106 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 RNU6-306P-201ENST00000384617 107 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 RNU6-278P-201ENST00000390945 109 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 SNORA77-201ENST00000408716 125 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC009238.2-201ENST00000431026 355 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC6.4□□□□□ -1.38
RC3H1Q5TC82 FCF1P4-201ENST00000448326 183 ntBASIC6.4□□□□□ -1.38
RC3H1Q5TC82 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms