Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC027287.1-201ENST00000553115 1453 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 MTND5P33-201ENST00000571250 1450 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 Y_RNA.70-201ENST00000362886 110 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 RNU6-797P-201ENST00000363101 109 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 U8.3-201ENST00000363321 132 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 MTND4P28-201ENST00000426217 387 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC018644.1-201ENST00000429934 551 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC073614.1-201ENST00000438690 650 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 RPL23AP81-201ENST00000455252 467 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC146507.1-201ENST00000468335 354 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 RPS3AP17-201ENST00000472594 777 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC012158.1-204ENST00000483430 465 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC105252.1-201ENST00000503089 286 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 ARL2BPP6-201ENST00000512757 439 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 RNU6-430P-201ENST00000517078 107 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 HSPE1P5-201ENST00000561489 272 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC060771.1-201ENST00000582031 164 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 MIR4719-201ENST00000585233 84 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AL161729.4-201ENST00000604650 476 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AL160290.3-201ENST00000604869 165 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC008966.2-201ENST00000606157 453 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC025253.1-201ENST00000613623 543 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC009159.1-201ENST00000618386 642 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AL139089.1-201ENST00000620372 975 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC104985.2-201ENST00000620598 500 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC012150.2-201ENST00000621300 544 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC244100.1-202ENST00000621554 382 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AC039056.2-201ENST00000622261 511 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.38□□□□□ -1.71
SLC44A4Q53GD3 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 SNORD46.1-201ENST00000364139 104 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 Y_RNA.333-201ENST00000365274 102 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 RNU1-63P-201ENST00000383902 164 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 RNU6-356P-201ENST00000384140 107 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 MIR181A1-201ENST00000385026 110 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 BX295541.1-201ENST00000417774 250 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC092832.1-201ENST00000422934 400 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 EIF1P3-201ENST00000423841 334 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 ISCA1P6-201ENST00000427740 390 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 MTND3P23-201ENST00000431980 347 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 MTND3P21-201ENST00000433774 331 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 ELOCP18-201ENST00000434209 337 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 UBE2V1P7-201ENST00000446395 340 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 NFU1P2-201ENST00000448700 469 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 MTND2P24-201ENST00000453434 806 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC098799.2-201ENST00000509466 868 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC017037.2-201ENST00000513850 890 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC022483.1-201ENST00000514020 567 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC135001.1-201ENST00000544546 283 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 MIR5685-201ENST00000579080 79 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC020914.4-201ENST00000597690 277 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 CKS1BP3-201ENST00000600888 237 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC112230.1-201ENST00000604342 547 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AL359999.1-201ENST00000604513 294 ntBASIC4.37□□□□□ -1.71
SLC44A4Q53GD3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms